LOCUS AEE80145.1 510 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Calcium-dependent lipid-binding (
CaLB domain) family protein protein.
ACCESSION CP002686-8996
PROTEIN_ID AEE80145.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="NTMC2T4"
/locus_tag="AT3G61050"
/gene_synonym="AtCLB"
/gene_synonym="calcium-dependent lipid-binding protein"
/gene_synonym="NTMC2TYPE4"
/inference="Similar to RNA sequence,
EST:INSD:DR265269.1,INSD:AU235298.1,INSD:BP792171.1,
INSD:BP801131.1,INSD:BP841659.1,INSD:EL267798.1,
INSD:AV441156.1,INSD:ES193914.1,INSD:AV555732.1,
INSD:DR265265.1,INSD:BP582327.1,INSD:EL108183.1,
INSD:EL251064.1,INSD:EL210046.1,INSD:ES045853.1,
INSD:EL196302.1,INSD:EL980894.1,INSD:BX834528.1,
INSD:BP568754.1,INSD:EL176138.1,INSD:EL314268.1,
INSD:EH842305.1,INSD:EL125118.1,INSD:EL193469.1,
INSD:EL072342.1,INSD:BP790114.1,INSD:DR265266.1,
INSD:DR370374.1,INSD:BP600147.1,INSD:BP562947.2,
INSD:ES132003.1,INSD:ES109226.1,INSD:ES010219.1,
INSD:EH904001.1,INSD:EL135078.1,INSD:ES174987.1,
INSD:ES205751.1,INSD:EH969153.1,INSD:EH956825.1,
INSD:ES173098.1,INSD:EH918126.1,INSD:EG423250.1,
INSD:BP571707.1,INSD:DR265267.1,INSD:EH866696.1,
INSD:EL096237.1,INSD:ES098631.1,INSD:EL211376.1,
INSD:ES097158.1,INSD:ES136313.1,INSD:EL195179.1,
INSD:T42317.1,INSD:ES158994.1,INSD:EH877384.1,
INSD:BP575651.1,INSD:BP592332.1,INSD:BP667964.1,
INSD:EL144923.1,INSD:EL284996.1,INSD:BP642862.1,
INSD:EL206808.1,INSD:ES179804.1,INSD:BP606516.1,
INSD:AU225964.1,INSD:ES125938.1,INSD:BP566887.1,
INSD:AV518057.1,INSD:AI994558.1,INSD:EL130972.1,
INSD:BP857692.1,INSD:BP638919.1,INSD:BP575793.1,
INSD:EL982799.1,INSD:DR265268.1,INSD:EL283859.1,
INSD:BP810245.1,INSD:AV555667.1,INSD:EL273912.1,
INSD:EL235423.1,INSD:EL043249.1,INSD:BP583421.1,
INSD:EL088124.1,INSD:ES080630.1,INSD:EL093872.1,
INSD:EL123555.1,INSD:EL092746.1,INSD:EL255270.1,
INSD:EH953394.1,INSD:EL055524.1,INSD:EL304264.1,
INSD:BP581735.1,INSD:AV442158.1,INSD:EL102355.1,
INSD:BP847472.1,INSD:AV556670.1,INSD:CB255586.1,
INSD:EL069674.1,INSD:EL991785.1,INSD:ES167543.1,
INSD:EH899653.1,INSD:EL308543.1,INSD:BP565854.1,
INSD:BP574382.1,INSD:EL979802.1,INSD:EL993786.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK227322.1,INSD:BT004564.1,INSD:X96598.1"
/note="NTMC2T4; FUNCTIONS IN: lipid binding; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: male gametophyte, cultured cell, callus,
pollen tube; EXPRESSED DURING: M germinated pollen stage;
CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein
(InterPro:IPR018029), C2 calcium/lipid-binding domain,
CaLB (InterPro:IPR008973), C2 region (InterPro:IPR020477),
C2 calcium-dependent membrane targeting
(InterPro:IPR000008); BEST Arabidopsis thaliana protein
match is: Calcium-dependent lipid-binding (CaLB domain)
family protein (TAIR:AT3G61030.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT3G61050"
/db_xref="Araport:AT3G61050"
intron_pos 36:0 (1/10)
intron_pos 70:0 (2/10)
intron_pos 87:0 (3/10)
intron_pos 127:1 (4/10)
intron_pos 167:0 (5/10)
intron_pos 200:0 (6/10)
intron_pos 227:0 (7/10)
intron_pos 255:2 (8/10)
intron_pos 331:0 (9/10)
intron_pos 386:0 (10/10)
BEGIN
1 MGLISGILFG IIFGVALMAG WSRMMTHRSS KRVAKAVDMK LLGSLSRDDL KKICGDNFPQ
61 WISFPAFEQV KWLNKLLSKM WPYIAEAATM VIRDSVEPLL EDYRPPGITS LKFSKLTLGN
121 VAPKIEGIRV QSFKEGQVTM DVDLRWGGDP NIVLGVTALV ASIPIQLKDL QVFTVARVIF
181 QLADEIPCIS AVVVALLAEP KPRIDYTLKA VGGSLTAIPG LSDMIDDTVD TIVKDMLQWP
241 HRIVVPIGGI PVDLSDLELK PQGKLIVTVV KATNLKNKEL IGKSDPYATI YIRPVFKYKT
301 KAIENNLNPV WDQTFELIAE DKETQSLTVE VFDKDVGQDE RLGLVKLPLS SLEAGVTKEL
361 ELNLLSSLDT LKVKDKKDRG SITLKVHYHE FNKEEQMAAL EDEKKIMEER KRLKEAGVIG
421 STMDAVGMVG SGLGAGVGMV GTGIGTGVGL VGSGVSSGVG MVGSGFGAVG SGLSKAGRFM
481 GRTITGQSSK RSGSSTPVNT VPENDGAKQQ
//