LOCUS AEE80112.1 223 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana N-terminal nucleophile aminohydrolases
(Ntn hydrolases) superfamily protein protein.
ACCESSION CP002686-8952
PROTEIN_ID AEE80112.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PBF1"
/locus_tag="AT3G60820"
/gene_synonym="20S PROTEASOME BETA SUBUNIT PBF1"
/inference="Similar to RNA sequence,
EST:INSD:Z29000.1,INSD:ES002488.1,INSD:EL042133.1,
INSD:DR315998.1,INSD:DR315973.1,INSD:DR316003.1,
INSD:EL218019.1,INSD:EH953472.1,INSD:DR233726.1,
INSD:BP670479.1,INSD:DR315978.1,INSD:BP860317.1,
INSD:DR316017.1,INSD:EL085179.1,INSD:DR233725.1,
INSD:AV805996.1,INSD:AV801760.1,INSD:DR315985.1,
INSD:DR315989.1,INSD:DR315974.1,INSD:EG488392.1,
INSD:Z26076.1,INSD:AA067520.1,INSD:EL114740.1,
INSD:AV792717.1,INSD:ES093558.1,INSD:ES183055.1,
INSD:EL977287.1,INSD:ES118944.1,INSD:EL989915.1,
INSD:DR316010.1,INSD:ES215407.1,INSD:DR316002.1,
INSD:EL316901.1,INSD:EL973889.1,INSD:EG488391.1,
INSD:EH975501.1,INSD:BP849144.1,INSD:Z26386.1,
INSD:T04176.1,INSD:DR315999.1,INSD:DR319321.1,
INSD:DR316005.1,INSD:DR319320.1,INSD:BP840762.1,
INSD:ES099848.1,INSD:BP584940.1,INSD:BP630132.1,
INSD:AV784754.1,INSD:DR315984.1,INSD:BP614345.1,
INSD:ES065675.1,INSD:EH990315.1,INSD:DR315993.1,
INSD:EH894182.1,INSD:AV823722.1,INSD:EL275733.1,
INSD:EL974482.1,INSD:T22837.1,INSD:EL003896.1,
INSD:Z26405.1,INSD:DR315977.1,INSD:F19845.1,
INSD:BP595067.1,INSD:EL037496.1,INSD:DR233727.1,
INSD:T13966.1,INSD:DR316009.1,INSD:DR315981.1,
INSD:DR316006.1,INSD:EL256854.1,INSD:AV811574.1,
INSD:AA395097.1,INSD:EL973099.1,INSD:ES042285.1,
INSD:BP664344.1,INSD:DR315997.1,INSD:ES132042.1,
INSD:EH994853.1,INSD:BP576969.1,INSD:AI997981.1,
INSD:EL976528.1,INSD:ES189911.1,INSD:Z17986.1,
INSD:DR315994.1,INSD:DR316014.1,INSD:EH820753.1,
INSD:ES206196.1,INSD:DR315990.1,INSD:Z30497.1,
INSD:Z35020.1,INSD:DR315988.1,INSD:Z29001.1,
INSD:EL987087.1,INSD:DR315982.1,INSD:EL975059.1,
INSD:ES159936.1,INSD:AV785335.1,INSD:EH843676.1,
INSD:ES023269.1,INSD:F15499.1,INSD:ES035291.1,
INSD:ES022570.1,INSD:DR316013.1,INSD:DR316007.1,
INSD:DR315983.1,INSD:EL034945.1,INSD:DR315995.1,
INSD:DR315987.1,INSD:DR316008.1,INSD:DR288871.1,
INSD:EL975884.1,INSD:EH920649.1,INSD:DR315986.1,
INSD:BP850191.1,INSD:BE662863.1,INSD:T76007.1,
INSD:DR315991.1,INSD:BP633199.1,INSD:DR316016.1,
INSD:DR315980.1,INSD:BP612124.1,INSD:CB259036.1,
INSD:ES059122.1,INSD:EL143757.1,INSD:EG480849.1,
INSD:DR316001.1,INSD:EL152029.1,INSD:BP581212.1,
INSD:T76773.1,INSD:BX839756.1,INSD:DR315996.1,
INSD:ES100978.1,INSD:EL980416.1,INSD:BP791732.1,
INSD:EG480850.1,INSD:ES168541.1,INSD:BP849959.1,
INSD:BP860062.2,INSD:ES019483.1,INSD:EL190807.1,
INSD:DR316004.1,INSD:ES105295.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF043537.1,INSD:BX824626.1,INSD:AY086619.1,
INSD:X79806.1,INSD:AY081571.1,INSD:AY062790.1,
INSD:X67338.1"
/note="PBF1; FUNCTIONS IN: peptidase activity,
endopeptidase activity, threonine-type endopeptidase
activity; INVOLVED IN: defense response to fungus,
incompatible interaction, ubiquitin-dependent protein
catabolic process; LOCATED IN: proteasome core complex,
proteasome complex, plasma membrane, chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Proteasome,
beta-type subunit, conserved site (InterPro:IPR016050),
Proteasome, subunit alpha/beta (InterPro:IPR001353); BEST
Arabidopsis thaliana protein match is: proteasome beta
subunit C1 (TAIR:AT1G21720.1); Has 4354 Blast hits to 4354
proteins in 444 species: Archae - 499; Bacteria - 50;
Metazoa - 1642; Fungi - 1076; Plants - 489; Viruses - 0;
Other Eukaryotes - 598 (source: NCBI BLink)."
/db_xref="TAIR:AT3G60820"
/db_xref="Araport:AT3G60820"
intron_pos 16:2 (1/6)
intron_pos 52:2 (2/6)
intron_pos 80:0 (3/6)
intron_pos 123:1 (4/6)
intron_pos 171:0 (5/6)
intron_pos 200:0 (6/6)
BEGIN
1 MTKQHANWSP YDNNGGTCVA IAGSDYCVIA ADTRMSTGYS ILSRDYSKIH KLADRAVLSS
61 SGFQADVKAL QKVLKSRHLI YQHQHNKQMS CPAMAQLLSN TLYFKRFFPY YAFNVLGGLD
121 EEGKGCVFTY DAVGSYERVG YGAQGSGSTL IMPFLDNQLK SPSPLLLPKQ DSNTPLSEAE
181 AVDLVKTVFA SATERDIYTG DKLEIMILKA DGIKTELMDL RKD
//