LOCUS AEE80109.1 307 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DHHC-type zinc finger family protein protein.
ACCESSION CP002686-8949
PROTEIN_ID AEE80109.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G60800"
/inference="Similar to RNA sequence,
EST:INSD:EH917264.1,INSD:EH942009.1,INSD:AV543456.1,
INSD:EL224736.1,INSD:ES192391.1,INSD:AV829803.1,
INSD:BP863605.1,INSD:BP866577.1,INSD:AV808702.1,
INSD:AV525016.1,INSD:AU228853.1,INSD:F15403.1,
INSD:DR208992.1,INSD:BP856305.1,INSD:AU237764.1,
INSD:DR208990.1,INSD:AV518266.1,INSD:DR373036.1,
INSD:DR208991.1,INSD:EL093646.1,INSD:AI995324.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK229274.1,INSD:BX823737.1,INSD:BX822634.1,
INSD:BX822103.1,INSD:AY070381.1,INSD:AY096574.1"
/note="DHHC-type zinc finger family protein; FUNCTIONS IN:
zinc ion binding; INVOLVED IN: biological_process unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger,
DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana
protein match is: DHHC-type zinc finger family protein
(TAIR:AT4G22750.1); Has 5091 Blast hits to 5089 proteins
in 250 species: Archae - 0; Bacteria - 0; Metazoa - 2186;
Fungi - 767; Plants - 823; Viruses - 0; Other Eukaryotes -
1315 (source: NCBI BLink)."
/db_xref="TAIR:AT3G60800"
/db_xref="Araport:AT3G60800"
intron_pos 71:0 (1/6)
intron_pos 146:1 (2/6)
intron_pos 177:0 (3/6)
intron_pos 218:1 (4/6)
intron_pos 247:0 (5/6)
intron_pos 269:0 (6/6)
BEGIN
1 MHRSGTTMAW NVFKFCTALR GLGSIMILLV LGVVGVTYYA VVLTNYGPAL SQGGLDSLAA
61 LTILILFHFL LAMLLWSYFS VVFTDPGVVP PNWRPSTDEE RGESDPLNSL DFVGLQSDSS
121 SSNPRVRFCR KCNQLKPSRC HHCSVCGRCV LKMDHHCVWV VNCVGALNYK YFLLFLFYTF
181 LETTLVTLVL MPHFIAFFSD EEIPGTPGTL ATTFLAFVLN LAFALSVMGF LIMHISLVAG
241 NTTTIEAYEK KTTTKWRYDL GKKKNFEQVF GMDKRYWLIP GYTEEDLRRM PELQGLEYPS
301 KPDFDSQ
//