LOCUS AEE80068.1 438 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 3'-5'-exoribonuclease family protein protein.
ACCESSION CP002686-8898
PROTEIN_ID AEE80068.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="CER7"
/locus_tag="AT3G60500"
/gene_synonym="ECERIFERUM 7"
/gene_synonym="G3"
/inference="Similar to RNA sequence,
EST:INSD:ES082522.1,INSD:AU227961.1,INSD:EL320451.1,
INSD:EH979384.1,INSD:EG458135.1,INSD:ES081956.1,
INSD:ES101712.1,INSD:AA713250.1,INSD:DR383507.1,
INSD:ES213650.1,INSD:EL037760.1,INSD:ES045729.1,
INSD:EL325727.1,INSD:BP856682.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT005701.1,INSD:BT004196.1"
/note="ECERIFERUM 7 (CER7); CONTAINS InterPro DOMAIN/s:
Exoribonuclease, phosphorolytic domain 2
(InterPro:IPR015847), Exoribonuclease, phosphorolytic
domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain
2-type fold (InterPro:IPR020568); BEST Arabidopsis
thaliana protein match is: ribonuclease PH45A
(TAIR:AT3G12990.3); Has 1195 Blast hits to 1195 proteins
in 321 species: Archae - 243; Bacteria - 19; Metazoa -
358; Fungi - 187; Plants - 157; Viruses - 0; Other
Eukaryotes - 231 (source: NCBI BLink)."
/db_xref="TAIR:AT3G60500"
/db_xref="Araport:AT3G60500"
intron_pos 46:2 (1/8)
intron_pos 116:2 (2/8)
intron_pos 148:2 (3/8)
intron_pos 187:0 (4/8)
intron_pos 214:0 (5/8)
intron_pos 277:0 (6/8)
intron_pos 356:2 (7/8)
intron_pos 376:1 (8/8)
BEGIN
1 MEGRLANMWR LTVNESKFVE TALQSELRVD GRGLYDYRKL TIKFGKEYGS SEVQLGQTHV
61 MGFVTAQLVQ PYKDRPNEGS LSIFTEFSPM ADPSFEPGRP GESAVELGRI IDRGLRESRA
121 VDTESLCVLA GKMVWSVRID LHILDNGGNL VDAANIAALA ALMTFRRPDC TVGGENGQEV
181 IIHPLEEREP LPLIIHHLPI AFTFGFFNKG NIVVMDPTYV EEAVMCGRMT VTVNANGDIC
241 AIQKPGEEGV NQSVILHCLR LASSRAAATT KIIREEVEAY NCERSLQKVK RHPTLAKSEV
301 SGPTVAVKEE HRKSSDQERA AEISREHVER LKLSTEEVRS SKEEEAANFK GGPSNWDPYS
361 EAMDVDSLKV SLASRGDPVT KSSSTKKMNG SGNAQKVGVE ISVEEVTGEL GKKDTKHKDG
421 EMTLKDAVKP KKKRKNKS
//