LOCUS AEE80067.1 256 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Integrase-type DNA-binding superfamily
protein protein.
ACCESSION CP002686-8897
PROTEIN_ID AEE80067.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G60490"
/inference="Similar to RNA sequence,
EST:INSD:ES060380.1,INSD:DN604748.1,INSD:AU226439.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT029458.1,INSD:AY560848.1"
/note="Integrase-type DNA-binding superfamily protein;
FUNCTIONS IN: DNA binding, sequence-specific DNA binding
transcription factor activity; INVOLVED IN: regulation of
transcription, DNA-dependent; LOCATED IN: nucleus,
chloroplast; EXPRESSED IN: leaf apex, hypocotyl, root,
flower; EXPRESSED DURING: petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s: DNA-binding,
integrase-type (InterPro:IPR016177), Pathogenesis-related
transcriptional factor/ERF, DNA-binding
(InterPro:IPR001471); BEST Arabidopsis thaliana protein
match is: Integrase-type DNA-binding superfamily protein
(TAIR:AT2G44940.1); Has 5687 Blast hits to 5580 proteins
in 251 species: Archae - 0; Bacteria - 11; Metazoa - 1;
Fungi - 6; Plants - 5663; Viruses - 0; Other Eukaryotes -
6 (source: NCBI BLink)."
/db_xref="TAIR:AT3G60490"
/db_xref="Araport:AT3G60490"
BEGIN
1 MGKQINIESS ATHHQDNIVS VITATISSSS VVTSSSDSWS TSKRSLVQDN DSGGKRRKSN
61 VSDDNKNPTS YRGVRMRSWG KWVSEIREPR KKSRIWLGTY PTAEMAARAH DVAALAIKGN
121 SGFLNFPELS GLLPRPVSCS PKDIQAAATK AAEATTWHKP VIDKKLADEL SHSELLSTAQ
181 SSTSSSFVFS SDTSETSSTD KESNEETVFD LPDLFTDGLM NPNDAFCLCN GTFTWQLYGE
241 EDVGFRFEEP FNWQND
//