LOCUS AEE80055.1 558 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Mitochondrial transcription termination
factor family protein protein.
ACCESSION CP002686-8882
PROTEIN_ID AEE80055.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SHOT1"
/locus_tag="AT3G60400"
/gene_synonym="suppressor of hot1-4 1"
/inference="Similar to RNA sequence,
EST:INSD:DR361282.1,INSD:DR377594.1,INSD:BX837188.1,
INSD:EL169400.1,INSD:ES126002.1,INSD:AV554907.1,
INSD:DR361284.1,INSD:BE528006.1,INSD:DR361283.1,
INSD:BX834290.1"
/note="Mitochondrial transcription termination factor
family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial
transcription termination factor-related
(InterPro:IPR003690); BEST Arabidopsis thaliana protein
match is: Mitochondrial transcription termination factor
family protein (TAIR:AT5G06810.1); Has 395 Blast hits to
388 proteins in 23 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 394; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink)."
/db_xref="TAIR:AT3G60400"
/db_xref="Araport:AT3G60400"
BEGIN
1 MFMVRLKFAS ISHNFSTVAA KHRRVPSKYK SLAIGKAQQA ITDYLHTTRS LSYTHAEQIA
61 SNASVSIRNL ILKLDFSVPT FSKSLRKHLS YHPINEFEFF FESIGIDYSE VSEFLPEKKF
121 FFSEDRTVLD AAFALSGFGF PWNKLGKLYK EERLVFVQRP GEIESRLLKF KDIGFSTVAV
181 IGTCLAIPRT LCGGGELGSE IRCLFVKLKR LFDEFDSHHL FEENVDSWLA VSRKIRIFYD
241 LGCENEEMWE LMCRNKSLFL EYSEEALMNK AGYFCRFGVS KEDAALLILR NPAIMNFDLE
301 KPVISVTGML KHFGLRQDEV DAVAQKYPYV FGRNQLKNLP YVLRAIDLHE RIFDILKNGN
361 HHLLASYTLM DPDEDLEREY QEGLEELQNS RTKRHNIQKL DFLHEIGFGE NGITMKVLQH
421 VHGTAVELHD RFQILLNSGI IFSKICMLIR SAPKILNQKP HSIQDKLRFL CGEMGDSLDY
481 LEVFPAYLCF DLENRISPRF RFHKWLVEKG FSEKSYSIAS IVATSEKAFI ARLYGIHPAI
541 PKHWFERFSS RKTRDTVS
//