LOCUS AEE80005.1 838 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box family protein protein.
ACCESSION CP002686-8804
PROTEIN_ID AEE80005.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G60040"
/inference="Similar to RNA sequence,
EST:INSD:AU239700.1,INSD:EL121771.1"
/note="F-box family protein; FUNCTIONS IN: nucleic acid
binding; INVOLVED IN: N-terminal protein myristoylation;
LOCATED IN: plasma membrane; EXPRESSED IN: male
gametophyte, cultured cell; EXPRESSED DURING: L mature
pollen stage, M germinated pollen stage; CONTAINS InterPro
DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810),
F-box domain, Skp2-like (InterPro:IPR022364),
Pentatricopeptide repeat (InterPro:IPR002885),
Polynucleotidyl transferase, ribonuclease H fold
(InterPro:IPR012337), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box/RNI-like superfamily protein
(TAIR:AT1G06630.2); Has 42185 Blast hits to 11085 proteins
in 246 species: Archae - 5; Bacteria - 27; Metazoa - 105;
Fungi - 161; Plants - 41065; Viruses - 0; Other Eukaryotes
- 822 (source: NCBI BLink)."
/db_xref="TAIR:AT3G60040"
/db_xref="Araport:AT3G60040"
intron_pos 132:1 (1/8)
intron_pos 188:0 (2/8)
intron_pos 213:1 (3/8)
intron_pos 536:0 (4/8)
intron_pos 584:0 (5/8)
intron_pos 667:0 (6/8)
intron_pos 687:1 (7/8)
intron_pos 733:1 (8/8)
BEGIN
1 MGIGWSLHNR DGTQILHGSG AIHPTQSPTE AEAEALRLAV LDLRRLGYSH VTFCGDLKLI
61 YDTLQRCALR GNNASWKYLH IATYLADVLK ISKLCSFNFI HISRDANDIA DRLAKQARCN
121 GLDYVICWTS SSLVLNVKQR NYVTDIYNDV NNISSINAFQ DLAGSLDELK TTSFIVVLTF
181 WVCFLIKTPI KFRIEGTTPS FSGSVFALLH DSVSGTFISM DAKMFDTICS RDAISWLPDE
241 VLGKILSLIP TKQAVSTSLL AKKWRTIFRL VDHLELDDSF SLQAVKDQTP GLRKHVRFVF
301 TEDFKIFVDR TLALQCDYPI KNFSLKCHVS KYDERQKACV GRWISNVVGR GVFELDLRMK
361 DPGIHFLPPH LVASKTLVKL TLGTQLCLGQ LPSYVSLPSL KSLFIDTIVF YDIEDLCCVL
421 LAGCPVLEEL SVHHHDFIAT PHTISSPTLK RLSVDYHCPD DVDSASHMSF DLPKLVYLEY
481 SHCALGEYWQ INLESLVEAK LDLGLERKVL RMDVTDLIIG IRNVQSLHLS PDSVHVIYSY
541 CRHGLPVFKN LVNLSFGSKN KRGWRLLANL LKQSTKLETL IVKDLNGYTG DVSMPLNKVT
601 SLHILGYRGT ADEVKQLKSF IGEFECLELV QVDVAEAAED NGKILQSKRD LMMLLGVSLP
661 SKCQFKSVLD ELNVRVSGIL VIGVLDGTQL LLIILLHILG KGNKPLAALT TLNHMKEVGI
721 DPSVLHYTTL IDGYVVSGEL DKAKEMFREM TVKGQLPNVF TYNSMIRGLC MAGEFREACW
781 LLKEMESRGC NPNFVVYSTL VGYLRKAGKL SEARKVIKEM VKKGHYVHLV SKMMKYRR
//