LOCUS AEE80004.1 927 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana squamosa promoter-binding protein-
like 12 protein.
ACCESSION CP002686-8803
PROTEIN_ID AEE80004.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SPL12"
/locus_tag="AT3G60030"
/gene_synonym="squamosa promoter-binding protein-like 12"
/inference="Similar to RNA sequence,
EST:INSD:CB253881.1,INSD:BP788034.1,INSD:CA781408.1,
INSD:ES187214.1,INSD:EL297955.1,INSD:EL093652.1,
INSD:ES213209.1,INSD:EG475328.1,INSD:EL027475.1,
INSD:EL244762.1,INSD:AV523247.1,INSD:AV560459.1,
INSD:BP653896.1,INSD:EL020254.1,INSD:ES177298.1,
INSD:EL243790.1,INSD:BP609584.1,INSD:AV548089.1,
INSD:EH967743.1,INSD:AV535706.1,INSD:BP613472.1,
INSD:EG439439.1,INSD:BP561992.2,INSD:BU636075.1,
INSD:BP600629.1,INSD:EL205658.1,INSD:CB264559.1,
INSD:EL174984.1,INSD:AV561857.1,INSD:EG435588.1,
INSD:EG475327.1,INSD:EL216690.1,INSD:CD534599.1,
INSD:ES106486.1,INSD:BX840424.1,INSD:EL274063.1,
INSD:EH858552.1,INSD:BP805911.1,INSD:AV805128.1,
INSD:EG439438.1,INSD:EL182003.1,INSD:EL000085.1,
INSD:EL302960.1,INSD:ES200936.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT003817.1,INSD:AK229921.1,INSD:AJ132096.1,
INSD:AK230087.1"
/note="squamosa promoter-binding protein-like 12 (SPL12);
FUNCTIONS IN: sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription;
LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Ankyrin repeat-containing domain
(InterPro:IPR020683), Transcription factor, SBP-box
(InterPro:IPR004333); BEST Arabidopsis thaliana protein
match is: squamosa promoter binding protein-like 1
(TAIR:AT2G47070.1); Has 969 Blast hits to 908 proteins in
50 species: Archae - 0; Bacteria - 2; Metazoa - 21; Fungi
- 0; Plants - 938; Viruses - 0; Other Eukaryotes - 8
(source: NCBI BLink)."
/db_xref="TAIR:AT3G60030"
/db_xref="Araport:AT3G60030"
intron_pos 173:2 (1/9)
intron_pos 234:1 (2/9)
intron_pos 400:0 (3/9)
intron_pos 425:0 (4/9)
intron_pos 461:0 (5/9)
intron_pos 500:1 (6/9)
intron_pos 545:2 (7/9)
intron_pos 596:0 (8/9)
intron_pos 785:0 (9/9)
BEGIN
1 MEARIEGEVE GHSLEYGFSG KRSVEWDLND WKWNGDLFVA TQLNHGSSNS SSTCSDEGNV
61 EIMERRRIEM EKKKKRRAVT VVAMEEDNLK DDDAHRLTLN LGGNNIEGNG VKKTKLGGGI
121 PSRAICCQVD NCGADLSKVK DYHRRHKVCE IHSKATTALV GGIMQRFCQQ CSRFHVLEEF
181 DEGKRSCRRR LAGHNKRRRK ANPDTIGNGT SMSDDQTSNY MLITLLKILS NIHSNQSDQT
241 GDQDLLSHLL KSLVSQAGEH IGRNLVGLLQ GGGGLQASQN IGNLSALLSL EQAPREDIKH
301 HSVSETPWQE VYANSAQERV APDRSEKQVK VNDFDLNDIY IDSDDTTDIE RSSPPPTNPA
361 TSSLDYHQDS RQSSPPQTSR RNSDSASDQS PSSSSGDAQS RTDRIVFKLF GKEPNDFPVA
421 LRGQILNWLA HTPTDMESYI RPGCIVLTIY LRQDEASWEE LCCDLSFSLR RLLDLSDDPL
481 WTDGWLYLRV QNQLAFAFNG QVVLDTSLPL RSHDYSQIIT VRPLAVTKKA QFTVKGINLR
541 RPGTRLLCTV EGTHLVQEAT QGGMEERDDL KENNEIDFVN FSCEMPIASG RGFMEIEDQG
601 GLSSSFFPFI VSEDEDICSE IRRLESTLEF TGTDSAMQAM DFIHEIGWLL HRSELKSRLA
661 ASDHNPEDLF SLIRFKFLIE FSMDREWCCV MKKLLNILFE EGTVDPSPDA ALSELCLLHR
721 AVRKNSKPMV EMLLRFSPKK KNQTLAGLFR PDAAGPGGLT PLHIAAGKDG SEDVLDALTE
781 DPGMTGIQAW KNSRDNTGFT PEDYARLRGH FSYIHLVQRK LSRKPIAKEH VVVNIPESFN
841 IEHKQEKRSP MDSSSLEITQ INQCKLCDHK RVFVTTHHKS VAYRPAMLSM VAIAAVCVCV
901 ALLFKSCPEV LYVFQPFRWE LLEYGTS
//