LOCUS AEE79985.1 444 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RAB GDP dissociation inhibitor 2 protein.
ACCESSION CP002686-8779
PROTEIN_ID AEE79985.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="GDI2"
/locus_tag="AT3G59920"
/gene_synonym="ATGDI2"
/gene_synonym="RAB GDP dissociation inhibitor 2"
/gene_synonym="RAB GDP DISSOCIATION INHIBITOR 2"
/inference="Similar to RNA sequence,
EST:INSD:BP624183.1,INSD:AV527700.1,INSD:EH944494.1,
INSD:EH952450.1,INSD:BP793921.1,INSD:BP609114.1,
INSD:AV560717.1,INSD:EL114104.1,INSD:CF774191.1,
INSD:BP584557.1,INSD:AV801629.1,INSD:ES026263.1,
INSD:DR286849.1,INSD:DR286835.1,INSD:BP612919.1,
INSD:ES135230.1,INSD:DR286858.1,INSD:BP606316.1,
INSD:DR286850.1,INSD:ES043218.1,INSD:BE525854.1,
INSD:EL116653.1,INSD:DR286859.1,INSD:DR286856.1,
INSD:DR286843.1,INSD:BP627925.1,INSD:AV532190.1,
INSD:BP579052.1,INSD:EL185589.1,INSD:BP638216.1,
INSD:EH881441.1,INSD:DR286860.1,INSD:ES198268.1,
INSD:EL297176.1,INSD:EL209889.1,INSD:BP595841.1,
INSD:BP633637.1,INSD:AV821932.1,INSD:DR286868.1,
INSD:ES070172.1,INSD:EG486531.1,INSD:AV802655.1,
INSD:BP863920.1,INSD:EH832710.1,INSD:ES180149.1,
INSD:EL973385.1,INSD:EH923346.1,INSD:DR286837.1,
INSD:BP848419.1,INSD:BP817905.1,INSD:BP586387.1,
INSD:DR286852.1,INSD:ES028914.1,INSD:DR286861.1,
INSD:DR286867.1,INSD:CB259483.1,INSD:EL313875.1,
INSD:BP788511.1,INSD:ES029813.1,INSD:EL969192.1,
INSD:DR286857.1,INSD:BP658598.1,INSD:DR286846.1,
INSD:EL254648.1,INSD:ES145034.1,INSD:BP847074.1,
INSD:BP794922.1,INSD:BP791612.1,INSD:EL075707.1,
INSD:ES193142.1,INSD:EH992829.1,INSD:AV540194.1,
INSD:ES012676.1,INSD:AV541333.1,INSD:BP642916.1,
INSD:DR286853.1,INSD:ES141216.1,INSD:EH806929.1,
INSD:AV802474.1,INSD:DR286845.1,INSD:ES184021.1,
INSD:BP596114.1,INSD:DR286865.1,INSD:DR286848.1,
INSD:ES112077.1,INSD:EH876449.1,INSD:H36038.1,
INSD:EL288222.1,INSD:BP564523.1,INSD:BP597499.1,
INSD:EL333168.1,INSD:BP566760.1,INSD:DR286844.1,
INSD:BP822335.1,INSD:DR286863.1,INSD:ES059590.1,
INSD:DR286839.1,INSD:EL994169.1,INSD:EG526160.1,
INSD:BP589520.1,INSD:BP847820.1,INSD:ES081647.1,
INSD:BP591005.1,INSD:EH960053.1,INSD:ES010233.1,
INSD:BP623379.1,INSD:BP584788.1,INSD:BP613935.1,
INSD:AV796326.1,INSD:EH851465.1,INSD:EL279263.1,
INSD:AV790055.1,INSD:AV539920.1,INSD:BP608353.1,
INSD:DR286842.1,INSD:ES086617.1,INSD:EL997772.1,
INSD:BP618025.1,INSD:BP589438.1,INSD:AV782519.1,
INSD:DR286840.1,INSD:BP628070.1,INSD:BP586898.1,
INSD:EH881950.1,INSD:BP566778.1,INSD:ES032310.1,
INSD:ES096810.1,INSD:AV532722.1,INSD:EL086945.1,
INSD:AV803625.1,INSD:DR286866.1,INSD:DR286851.1,
INSD:AI993779.1,INSD:AV818842.1,INSD:EH878992.1,
INSD:AV533861.1,INSD:BP593296.1,INSD:BP658821.1,
INSD:BP654152.1,INSD:BP670990.1,INSD:DR370747.1,
INSD:ES026786.1,INSD:EG526161.1,INSD:BP845907.1,
INSD:AV803212.1,INSD:AV793158.1,INSD:EH880485.1,
INSD:DR286836.1,INSD:EL268322.1,INSD:BP599324.1,
INSD:EL081081.1,INSD:CA782057.1,INSD:DR286862.1,
INSD:BP824096.1,INSD:AV792285.1,INSD:DR286841.1,
INSD:BP612016.1,INSD:BP593483.1,INSD:BP612047.1,
INSD:BP609042.1,INSD:ES214027.1,INSD:DR286854.1,
INSD:AV788418.1,INSD:DR286864.1,INSD:EG486532.1,
INSD:DR286855.1,INSD:BP811149.1,INSD:BP586917.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX842149.1,INSD:AB005560.1,INSD:BT000011.1,
INSD:AJ001397.1,INSD:AY081269.1"
/note="RAB GDP dissociation inhibitor 2 (GDI2); FUNCTIONS
IN: RAB GDP-dissociation inhibitor activity; INVOLVED IN:
regulation of GTPase activity, protein transport; LOCATED
IN: cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Rab GTPase activator
(InterPro:IPR002005), GDP dissociation inhibitor
(InterPro:IPR018203), Rab GDI protein
(InterPro:IPR000806); BEST Arabidopsis thaliana protein
match is: guanosine nucleotide diphosphate dissociation
inhibitor 1 (TAIR:AT2G44100.1); Has 1316 Blast hits to
1212 proteins in 257 species: Archae - 2; Bacteria - 2;
Metazoa - 653; Fungi - 287; Plants - 181; Viruses - 0;
Other Eukaryotes - 191 (source: NCBI BLink)."
/db_xref="TAIR:AT3G59920"
/db_xref="Araport:AT3G59920"
intron_pos 30:0 (1/11)
intron_pos 79:0 (2/11)
intron_pos 115:0 (3/11)
intron_pos 172:2 (4/11)
intron_pos 210:0 (5/11)
intron_pos 237:0 (6/11)
intron_pos 258:0 (7/11)
intron_pos 292:0 (8/11)
intron_pos 333:2 (9/11)
intron_pos 404:0 (10/11)
intron_pos 429:0 (11/11)
BEGIN
1 MDEEYEVIVL GTGLKECILS GLLSVDGVKV LHMDRNDYYG GESTSLNLNQ LWKKFRGEEK
61 APEHLGASRD YNVDMMPKFM MGNGKLVRTL IHTDVTKYLS FKAVDGSYVF VKGKVQKVPA
121 TPMEALKSSL MGIFEKRRAG KFFSFVQEYD EKDPKTHDGM DLTRVTTKEL IAKYGLDGNT
181 IDFIGHAVAL HTNDQHLDQP AFDTVMRMKL YAESLARFQG TSPYIYPLYG LGELPQAFAR
241 LSAVYGGTYM LNKPECKVEF DEGGKVIGVT SEGETAKCKK IVCDPSYLPN KVRKIGRVAR
301 AIAIMSHPIP NTNDSHSVQV IIPQKQLARK SDMYVFCCSY SHNVAPKGKF IAFVSTDAET
361 DNPQTELKPG TDLLGPVDEI FFDMYDRYEP VNEPELDNCF ISTSYDATTH FETTVADVLN
421 MYTLITGKQL DLSVDLSAAS AAEE
//