LOCUS       AEE79978.1               388 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana Pectin lyase-like superfamily protein protein.
ACCESSION   CP002686-8771
PROTEIN_ID  AEE79978.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /locus_tag="AT3G59850"
                     /inference="Similar to RNA sequence,
                     EST:INSD:N97206.1,INSD:AI994651.1,INSD:H37131.1,
                     INSD:EH854227.1,INSD:BE526063.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:BT020180.1,INSD:BX823105.1,INSD:BX824469.1,
                     INSD:BX824927.1,INSD:BT015766.1,INSD:BX822380.1"
                     /note="Pectin lyase-like superfamily protein; FUNCTIONS
                     IN: polygalacturonase activity; INVOLVED IN: carbohydrate
                     metabolic process; LOCATED IN: endomembrane system;
                     EXPRESSED IN: embryo, pedicel; EXPRESSED DURING: 4
                     anthesis, C globular stage; CONTAINS InterPro DOMAIN/s:
                     Pectin lyase fold/virulence factor (InterPro:IPR011050),
                     Pectin lyase fold (InterPro:IPR012334), Glycoside
                     hydrolase, family 28 (InterPro:IPR000743), Parallel
                     beta-helix repeat (InterPro:IPR006626); BEST Arabidopsis
                     thaliana protein match is: Pectin lyase-like superfamily
                     protein (TAIR:AT2G43870.1); Has 4315 Blast hits to 4302
                     proteins in 546 species: Archae - 4; Bacteria - 1265;
                     Metazoa - 14; Fungi - 1413; Plants - 1493; Viruses - 2;
                     Other Eukaryotes - 124 (source: NCBI BLink)."
                     /db_xref="TAIR:AT3G59850"
                     /db_xref="Araport:AT3G59850"
     intron_pos      144:0 (1/3)
     intron_pos      240:2 (2/3)
     intron_pos      317:0 (3/3)
BEGIN
        1 MHSSLLIVLL FLLSVSSSSA QTYNILSYGA KPDGKTDSTK AFTVLWAKAC ASVKPVTILV
       61 PKGRFLLRSI IFDGSKCKRK SVTFRIQGTL VAPSDYRVIG KENYWILFQH LDGISVYGGV
      121 LDAQGASLWS CKKSGKNCPS GATSIGFQSS RNVVISGLTS LNSQMFHVAI NGCSNVKLDG
      181 VKVSADGNSP NTDGIHVQSS STVSILNSKI STGDDCVSIG PGTNGLWIEN VACGPGHGIS
      241 IGSLGKESVE VGVQNITVKT ATFTGTENGV RIKSWARPSN GFAKNIRFQH CVMNNVQNPI
      301 VIDQNYCPGN ENCPNQVSGI KISDVMFFDI HGTSATEVGV KLDCSSKKPC TGIRIQDVKL
      361 TYRNKPATTD CSHAGGSEAG FQRPNSCL
//