LOCUS AEE79899.1 116 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Protein Transporter, Pam16 protein.
ACCESSION CP002686-8647
PROTEIN_ID AEE79899.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="TXR1"
/locus_tag="AT3G59280"
/gene_synonym="AtPAM16"
/gene_synonym="MUSE5"
/gene_synonym="mutant"
/gene_synonym="PAM16"
/gene_synonym="snc1-enhancing 5"
/gene_synonym="THAXTOMIN A RESISTANT 1"
/inference="Similar to RNA sequence,
EST:INSD:EH932977.1,INSD:EG497236.1,INSD:BP837072.1,
INSD:ES169184.1,INSD:EH973628.1,INSD:EG497235.1,
INSD:DR289806.1,INSD:BP849771.1,INSD:ES138258.1,
INSD:AI996476.1,INSD:DR289808.1,INSD:DR289807.1,
INSD:BP661961.1,INSD:EH906356.1,INSD:EG456510.1,
INSD:BP863169.1,INSD:AV794240.1,INSD:DR359625.1,
INSD:EL283956.1,INSD:AV796615.1,INSD:BP620621.1,
INSD:AV821341.2,INSD:DR380066.1,INSD:EL316252.1,
INSD:EL057865.1,INSD:EH838576.1,INSD:EL188401.1,
INSD:EL119622.1,INSD:ES207217.1,INSD:BP849193.1,
INSD:BP844893.1,INSD:BP665383.1,INSD:DR378002.1,
INSD:EH797417.1,INSD:BP843393.1,INSD:EL305325.1,
INSD:EH905395.1,INSD:EL335268.1,INSD:ES032398.1,
INSD:BP855887.1,INSD:AV781747.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF380643.1,INSD:BX825722.1,INSD:BX825666.1"
/note="THAXTOMIN A RESISTANT 1 (TXR1); INVOLVED IN:
biological_process unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein Transporter, Pam16
(InterPro:IPR005341); BEST Arabidopsis thaliana protein
match is: Protein Transporter, Pam16 (TAIR:AT5G61880.2);
Has 398 Blast hits to 398 proteins in 167 species: Archae
- 0; Bacteria - 0; Metazoa - 159; Fungi - 132; Plants -
79; Viruses - 0; Other Eukaryotes - 28 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G59280"
/db_xref="Araport:AT3G59280"
intron_pos 2:0 (1/3)
intron_pos 31:1 (2/3)
intron_pos 76:0 (3/3)
BEGIN
1 MAGRLLANLI VMGSGIIGRA VFQAYRQALA NASKSGVAQE AMQNGVRQAG KAITEQEARQ
61 ILGVTEKTSW EEILQKYDKL FENNAKAGSF YLQSKVHRAK ECLEVVYRSQ GNGTPS
//