LOCUS AEE79889.1 484 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box/RNI-like superfamily protein protein.
ACCESSION CP002686-8635
PROTEIN_ID AEE79889.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G59210"
/inference="Similar to RNA sequence,
EST:INSD:BP664354.1,INSD:T76516.1,INSD:EG476841.1,
INSD:AA394563.1,INSD:EG476843.1,INSD:EL243779.1,
INSD:EH914367.1,INSD:AU239904.1,INSD:ES207468.1,
INSD:AU231260.1,INSD:EL321052.1,INSD:EG450232.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX842148.1,INSD:AK119022.1"
/note="F-box/RNI-like superfamily protein; CONTAINS
InterPro DOMAIN/s: F-box domain, cyclin-like
(InterPro:IPR001810), F-box domain, Skp2-like
(InterPro:IPR022364), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: RNI-like
superfamily protein (TAIR:AT3G59230.1); Has 1978 Blast
hits to 1924 proteins in 26 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 1978; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G59210"
/db_xref="Araport:AT3G59210"
intron_pos 313:0 (1/2)
intron_pos 360:0 (2/2)
BEGIN
1 MDDCSKDIIN CLPDNLLCQI LSNLSTKEAA LTSLLSKRWR YLFALVPNLD FDVLPSLHPE
61 VAMQDQDQTS FIDFVDRVLK LRGKDHINKF SLKCGDGIED EDVFPWILNT LRHGVSDLSL
121 HVSPSLVYWL PSKVFASKTL VRLKIGPKDG PRVKLRNVCL PKLKTLNLDS VVFEEGKIGF
181 AKLLSGCPVL EELSLLNLAW DRWDSCSVSS KILKRLTLYC AHSSRNPKSV SFDTPNVVYF
241 EYSDNIANKY PKVNFDSLVE ASIGIRMTKV QKANARYVSD VDEETEMVGN ATDLLMGICN
301 VKTLYLSYDT LETLNLCCQV IPVFNNLTHL TIESHPELGW ESLPNLLKSC PNLGTLVFQG
361 LLHKATDRCG DVCMCQGLEN SHSCLSSSPV KCLKILKFGE TNDDDDMEIE MEQIKNFLEK
421 MPNLEQLIIY YESSIDNDLV RVSSQLQEVP TVASLKCKIQ VISDNLSLSS TLPISLSMEN
481 GFHL
//