LOCUS AEE79886.1 475 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Protein with RNI-like/FBD-like domain protein.
ACCESSION CP002686-8629
PROTEIN_ID AEE79886.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G59180"
/inference="Similar to RNA sequence,
EST:INSD:EG419165.1,INSD:EG419222.1,INSD:EG419221.1,
INSD:EG419146.1,INSD:EG419224.1,INSD:EG426483.1,
INSD:EG419158.1,INSD:EG419216.1,INSD:EG419220.1,
INSD:EG419215.1,INSD:EG419128.1,INSD:EG419217.1,
INSD:EG419210.1,INSD:EG419218.1,INSD:EG419125.1,
INSD:EG419126.1,INSD:EG419211.1,INSD:EG419155.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY954855.1"
/note="Protein with RNI-like/FBD-like domains; CONTAINS
InterPro DOMAIN/s: FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box/RNI-like
superfamily protein (TAIR:AT3G59210.4); Has 885 Blast hits
to 857 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 885; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G59180"
/db_xref="Araport:AT3G59180"
intron_pos 280:0 (1/2)
intron_pos 327:0 (2/2)
BEGIN
1 MKERIRFLQV LWILWIEYWH CKAILLSKHR RRWIHKSFKL FVNRLMALQG NAPLNRFSLK
61 CKVRCDSACV DGWIINVLDR GVLDLDLNIS SESDYKLPSE VFLNKTLVRL KLGGKDEFII
121 DVEEVFLPKL KTLYLHGFVC FEDSGVACAK LISGCPVLEE LVMINLMWGL MDVCSVSNPT
181 LKRVTICSEI IDYNPQSVSF DTPNLVYLEF TDVVAIKYPK VNLDSLVDAR LGLRLTPCQT
241 TKARRSVKSV GQGMMGNAAD FLMGISNVKI LYLSFDTLEV LNFCCKTIPL FNNLTYLTIE
301 TNEDVGWESL SNILENCPNL ETIIFKGLHY RDTNQCWDER YRFKDTNKCF EEDADMCMCK
361 PWEATPICLS SSSVKILEVL KFGEVTSYKD DMDRQTEVIK FFLETMPNLE QVILYYDTPF
421 DDDLSILSTE LQMLEKVASP KCKIQVISDN ISYSSTVHSS SSTSGLVFLN NTFPV
//