LOCUS AEE79885.1 473 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box/RNI-like superfamily protein protein.
ACCESSION CP002686-8628
PROTEIN_ID AEE79885.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G59170"
/inference="Similar to RNA sequence,
EST:INSD:EG419159.1,INSD:EG419160.1,INSD:EG419156.1,
INSD:EG419148.1,INSD:EG426484.1"
/note="F-box/RNI-like superfamily protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: sperm cell, male gametophyte,
flower; EXPRESSED DURING: L mature pollen stage, 4
anthesis; CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like
(InterPro:IPR022364), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: F-box/RNI-like
superfamily protein (TAIR:AT3G59160.1); Has 1913 Blast
hits to 1849 proteins in 25 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 1913; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G59170"
/db_xref="Araport:AT3G59170"
intron_pos 343:0 (1/2)
intron_pos 390:0 (2/2)
BEGIN
1 MDSVSKDMIN VLPDALLCHI LSFLTTKEAA STSLLSRRWR YLLAFVPNLE FDDSVYLHRD
61 KRVKNTLHEK GFVGFVLLVN NKRKKLSTSF PDFVDRILAL QGNSPLDKFS LKMVDGHDPV
121 DPDSVVPWIH KVLVRGVSDL HLVVDMNEWT SDPLPSRIFL SETLVKLTIK IRDGPFIDVK
181 HVHLPKLKTL YLQSVMFDEN DIGFRKLLSG CPVLEELVLD GMGSCVWTSF TVSVATLKRL
241 TFCCQKMSSF GYMHDDENPN NVSFDTPNLV YLEYAQVIAN NYPKVNFDLL VEAKIDIWMT
301 VDQIREVRLR KNEVNCMVGN ATDFIVGLRN VRVLYLSPET LEVLTYCCKQ IPIFENLSHL
361 TIKSDPNVGW KPLTKLLKNS PKLETLVFQG LLHRDNKEDV AISSSSVKVL KIFLSGDKLK
421 KQIEKVKHFL KTMPRLEQLV FYYDVKVLSQ LHMLSRLASP KCKIHLIPSR ESV
//