LOCUS AEE79864.1 590 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002686-8606
PROTEIN_ID AEE79864.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G59040"
/inference="Similar to RNA sequence,
EST:INSD:EL191670.1,INSD:ES086477.1,INSD:ES104186.1,
INSD:EH826526.1,INSD:EL188481.1,INSD:EL107973.1,
INSD:EH906926.1,INSD:DR378388.1,INSD:EL062271.1,
INSD:EL264793.1,INSD:AV784561.1,INSD:ES078780.1,
INSD:EL177086.1,INSD:ES149977.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX822687.1,INSD:BT000951.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G02860.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT3G59040"
/db_xref="Araport:AT3G59040"
intron_pos 132:0 (1/4)
intron_pos 312:0 (2/4)
intron_pos 353:2 (3/4)
intron_pos 386:2 (4/4)
BEGIN
1 MFFSFRLLKV LVFHLQIRPC VLLCVSQRKL QNNIINVGVK IQNRFRVVCM GMLAPRKFLQ
61 KRRKMEVFKD AADETDQKRW RGLMLEIEST GSAVPVLRQY KTDGDQGLPR DLVLGTLVRF
121 KQLKKWNLVS EILEWLRYQN WWNFSEIDFL MLITAYGKLG NFNGAERVLS VLSKMGSTPN
181 VISYTALMES YGRGGKCNNA EAIFRRMQSS GPEPSAITYQ IILKTFVEGD KFKEAEEVFE
241 TLLDEKKSPL KPDQKMYHMM IYMYKKAGNY EKARKVFSSM VGKGVPQSTV TYNSLMSFET
301 SYKEVSKIYD QMQRSDIQPD VVSYALLIKA YGRARREEEA LSVFEEMLDA GVRPTHKAYN
361 ILLDAFAISG MVEQAKTVFK SMRRDRIFPD LWSYTTMLSA YVNASDMEGA EKFFKRIKVD
421 GFEPNIVTYG TLIKGYAKAN DVEKMMEVYE KMRLSGIKAN QTILTTIMDA SGRCKNFGSA
481 LGWYKEMESC GVPPDQKAKN VLLSLASTQD ELEEAKELTG IRNETATIIA RVYGSDDDEE
541 GVEDISSESS DDEDEGDDDD DDARETVLYD KPQEGSLGYG SLQTEELVGL
//