LOCUS AEE79856.1 594 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box family protein protein.
ACCESSION CP002686-8596
PROTEIN_ID AEE79856.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G58980"
/inference="Similar to RNA sequence,
EST:INSD:AI998861.1,INSD:AV789815.1,INSD:BP821647.1,
INSD:EH918225.1,INSD:EL097434.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY142548.1"
/note="F-box family protein; CONTAINS InterPro DOMAIN/s:
F-box domain, cyclin-like (InterPro:IPR001810), F-box
domain, Skp2-like (InterPro:IPR022364), FBD-like
(InterPro:IPR006566), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box/RNI-like superfamily protein
(TAIR:AT3G58920.1); Has 1957 Blast hits to 1579 proteins
in 27 species: Archae - 0; Bacteria - 0; Metazoa - 1;
Fungi - 0; Plants - 1956; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G58980"
/db_xref="Araport:AT3G58980"
intron_pos 304:0 (1/3)
intron_pos 354:0 (2/3)
intron_pos 441:0 (3/3)
BEGIN
1 MDRISNLPNE IICHIVSFLS AKEAAFASIL SKRWRNLFTI VIKLQFDDSV KNEGSLKDFV
61 DGVLALPTSS RVRSCSLECR REFDPTHYDD FNRCICALLK RGILDLKLDI CAGRRYSLPL
121 EVFTCKTLVK LELGSDFGGF VVDLVPEDAF LPALETLLLN YIRFKDLRRC AFEKLLSACL
181 VLKELVIHNM EWERWKWSGN ISSPTLERLT ISHVDLYECE FTRINLDTPN LTYLELSDAV
241 PDDYPIVNLD SLVEVKLDLT LMVDHKYHGY VDDNDTISSN PTNLINGLRN VEIMNLQSPN
301 TFQAFSYFHE AIPVFKNLYH LTITNNDTVI GFCWEFLPFV IKKCPNLKTL VIDGPLHYNE
361 DRPKSVCHCL SGYSFLLSCP LEVLQITDYS GTPGEVEQLK HFLEKLSGLK LVKLHSLTRF
421 GSDKKKLLML PRASSKCKIK HYDSLENALL PSLKTLILDS VKFYDRCGCC AFQKLLSACP
481 VLVESVMRNL EWEDWEWSGC ASSQTLERLT IDHRYWAEHN LESFTFDTPS LTYLDYNAHV
541 PGSYPTVNLD SLVEAKLNLG FTTDLVEDDD DPFTSDPTNL IKGLRNVEIL RLWM
//