LOCUS AEE79852.1 618 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box/RNI-like superfamily protein protein.
ACCESSION CP002686-8592
PROTEIN_ID AEE79852.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G58940"
/inference="Similar to RNA sequence,
EST:INSD:AV821786.1,INSD:EH851597.1,INSD:EL979803.1,
INSD:AV782326.1,INSD:EL270268.1,INSD:ES132304.1"
/note="F-box/RNI-like superfamily protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro
DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810),
F-box domain, Skp2-like (InterPro:IPR022364), FBD-like
(InterPro:IPR006566); BEST Arabidopsis thaliana protein
match is: F-box/RNI-like superfamily protein
(TAIR:AT3G58930.1); Has 1892 Blast hits to 1858 proteins
in 32 species: Archae - 0; Bacteria - 2; Metazoa - 2;
Fungi - 2; Plants - 1882; Viruses - 0; Other Eukaryotes -
4 (source: NCBI BLink)."
/db_xref="TAIR:AT3G58940"
/db_xref="Araport:AT3G58940"
intron_pos 258:0 (1/4)
intron_pos 292:0 (2/4)
intron_pos 339:0 (3/4)
intron_pos 458:0 (4/4)
BEGIN
1 MDRVSNLPEE VRCHILSFLP TKHAALTSVL SKSWLNLWKF ETNLDIDDSD FLHPEEGKAE
61 RDEIRQSFVE FVDGVLALQG DSPIEKFSLK CITGIHPDHV NRWICNVLQR GVSDLYLFTD
121 FSDEDTEEDG GYRLPQEMFV SRTLVKLKLR SEHCVNWWHW DIGASLPNLK SLNIDSDLIF
181 FGEMEKFLSS FPVLEEVHMA NMEWRELDET MSSASLTKLS IHGTGVEEFE HPKSISIDTP
241 NLLYLNYSDL VAEDYPLDDE GDVVLQFCNV VKLINGIQNI QTLYLTEDTL EVLTMCCESM
301 PVFNNLKTLG LKSDEGRGWQ AVPALLRNCP HLEFLIIEGL LHSVTDKCGD ACDCISREDK
361 GRSLISCPVK KLEVRGFRGT IREKEMIRHF LEYFPCLDEM EIDAEENDST NFEVPRILKV
421 VAYRLHDVVS TEIVGHWQSS AQSGGWSQTQ MDEMYYELAP RNKERIYDMF FFMRRASSTV
481 PPPPPQEMSQ DYLQMQLEVA DLKERQRDQE AKLADLKERL RAMLDMIVDQ NPIIASALRA
541 REATNSEREK ASSGQEMTEK ERDYDALFDI IVEQNPMLAS AVRALRATDS ERAETSSNQE
601 MTELGQATAT YFPPREGE
//