LOCUS AEE79830.1 241 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana K-box region and MADS-box transcription
factor family protein protein.
ACCESSION CP002686-8562
PROTEIN_ID AEE79830.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SHP1"
/locus_tag="AT3G58780"
/gene_synonym="AGAMOUS-like 1"
/gene_synonym="AGL1"
/gene_synonym="SHATTERPROOF 1"
/inference="Similar to RNA sequence,
EST:INSD:ES026998.1,INSD:ES014136.1,INSD:ES204892.1,
INSD:ES158360.1,INSD:ES186082.1,INSD:BG459390.1,
INSD:ES044076.1,INSD:ES193626.1,INSD:ES122265.1,
INSD:ES066349.1,INSD:ES189491.1,INSD:ES052308.1,
INSD:ES129735.1,INSD:ES087043.1,INSD:ES153578.1,
INSD:ES004796.1,INSD:ES144809.1,INSD:ES085370.1,
INSD:ES202414.1,INSD:ES097470.1,INSD:ES127186.1,
INSD:ES149312.1,INSD:ES173730.1,INSD:EL974939.1,
INSD:ES056656.1,INSD:ES202733.1,INSD:ES125353.1,
INSD:ES115651.1,INSD:ES109723.1,INSD:ES042512.1,
INSD:ES188042.1,INSD:ES002743.1,INSD:ES195713.1,
INSD:ES140703.1,INSD:ES034538.1,INSD:ES183008.1,
INSD:ES138275.1,INSD:ES117013.1,INSD:ES060783.1,
INSD:ES085465.1,INSD:ES131487.1,INSD:EL993816.1,
INSD:ES083401.1,INSD:EL996272.1,INSD:ES171237.1,
INSD:ES120391.1,INSD:ES187866.1,INSD:ES017950.1,
INSD:DR327776.1,INSD:ES072903.1,INSD:EL977075.1,
INSD:ES209445.1,INSD:ES183243.1,INSD:ES063976.1,
INSD:ES066140.1,INSD:ES104035.1,INSD:ES056742.1,
INSD:ES131585.1,INSD:ES170976.1,INSD:ES035816.1,
INSD:ES199795.1,INSD:ES164662.1,INSD:ES132249.1,
INSD:EL998194.1,INSD:ES031187.1,INSD:ES134075.1,
INSD:EL979139.1,INSD:ES027163.1"
/inference="Similar to RNA sequence, mRNA:INSD:DQ446777.1"
/note="SHATTERPROOF 1 (SHP1); FUNCTIONS IN: protein
binding, DNA binding, sequence-specific DNA binding
transcription factor activity; INVOLVED IN: fruit
dehiscence, ovule development, carpel development; LOCATED
IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Transcription factor, MADS-box (InterPro:IPR002100),
Transcription factor, K-box (InterPro:IPR002487); BEST
Arabidopsis thaliana protein match is: K-box region and
MADS-box transcription factor family protein
(TAIR:AT2G42830.1); Has 7214 Blast hits to 7213 proteins
in 918 species: Archae - 0; Bacteria - 0; Metazoa - 630;
Fungi - 313; Plants - 6194; Viruses - 0; Other Eukaryotes
- 77 (source: NCBI BLink)."
/db_xref="TAIR:AT3G58780"
/db_xref="Araport:AT3G58780"
intron_pos 76:2 (1/6)
intron_pos 97:0 (2/6)
intron_pos 117:2 (3/6)
intron_pos 151:0 (4/6)
intron_pos 165:0 (5/6)
intron_pos 179:0 (6/6)
BEGIN
1 MEEGGSSHDA ESSKKLGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL
61 VIFSTRGRLY EYANNRYKKA CSDAVNPPSV TEANTQYYQQ EASKLRRQIR DIQNSNRHIV
121 GESLGSLNFK ELKNLEGRLE KGISRVRSKK NELLVAEIEY MQKREMELQH NNMYLRAKIA
181 EGARLNPDQQ ESSVIQGTTV YESGVSSHDQ SQHYNRNYIP VNLLEPNQQF SGQDQPPLQL
241 V
//