LOCUS AEE79829.1 248 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana K-box region and MADS-box transcription
factor family protein protein.
ACCESSION CP002686-8561
PROTEIN_ID AEE79829.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SHP1"
/locus_tag="AT3G58780"
/gene_synonym="AGAMOUS-like 1"
/gene_synonym="AGL1"
/gene_synonym="SHATTERPROOF 1"
/inference="Similar to RNA sequence,
EST:INSD:ES026998.1,INSD:ES014136.1,INSD:ES204892.1,
INSD:ES158360.1,INSD:ES186082.1,INSD:BG459390.1,
INSD:ES044076.1,INSD:ES193626.1,INSD:ES122265.1,
INSD:ES066349.1,INSD:ES189491.1,INSD:ES052308.1,
INSD:ES129735.1,INSD:ES087043.1,INSD:ES153578.1,
INSD:ES155755.1,INSD:ES004796.1,INSD:ES144809.1,
INSD:ES085370.1,INSD:ES202414.1,INSD:ES097470.1,
INSD:ES127186.1,INSD:ES149312.1,INSD:ES173730.1,
INSD:ES194255.1,INSD:EL974939.1,INSD:ES056656.1,
INSD:ES202733.1,INSD:ES125353.1,INSD:ES115651.1,
INSD:ES109723.1,INSD:ES120114.1,INSD:ES042512.1,
INSD:ES188042.1,INSD:ES002743.1,INSD:ES195713.1,
INSD:ES140703.1,INSD:ES034538.1,INSD:ES183008.1,
INSD:ES138275.1,INSD:ES117013.1,INSD:ES060783.1,
INSD:ES085465.1,INSD:ES131487.1,INSD:EL993816.1,
INSD:ES083401.1,INSD:ES171237.1,INSD:EL996272.1,
INSD:ES120391.1,INSD:ES187866.1,INSD:ES186995.1,
INSD:ES136842.1,INSD:ES017950.1,INSD:DR327776.1,
INSD:ES072903.1,INSD:EL977075.1,INSD:ES209445.1,
INSD:ES183243.1,INSD:ES063976.1,INSD:ES066140.1,
INSD:ES104035.1,INSD:ES056742.1,INSD:ES131585.1,
INSD:ES170976.1,INSD:ES035816.1,INSD:ES199795.1,
INSD:ES164662.1,INSD:ES132249.1,INSD:EL998194.1,
INSD:ES031187.1,INSD:ES134075.1,INSD:EL979139.1,
INSD:ES027163.1"
/inference="Similar to RNA sequence,
mRNA:INSD:DQ653159.1,INSD:AY086196.1"
/note="SHATTERPROOF 1 (SHP1); FUNCTIONS IN: protein
binding, DNA binding, sequence-specific DNA binding
transcription factor activity; INVOLVED IN: fruit
dehiscence, ovule development, carpel development; LOCATED
IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Transcription factor, MADS-box (InterPro:IPR002100),
Transcription factor, K-box (InterPro:IPR002487); BEST
Arabidopsis thaliana protein match is: K-box region and
MADS-box transcription factor family protein
(TAIR:AT2G42830.1); Has 7265 Blast hits to 7263 proteins
in 918 species: Archae - 0; Bacteria - 0; Metazoa - 648;
Fungi - 306; Plants - 6235; Viruses - 0; Other Eukaryotes
- 76 (source: NCBI BLink)."
/db_xref="TAIR:AT3G58780"
/db_xref="Araport:AT3G58780"
intron_pos 76:2 (1/6)
intron_pos 104:0 (2/6)
intron_pos 124:2 (3/6)
intron_pos 158:0 (4/6)
intron_pos 172:0 (5/6)
intron_pos 186:0 (6/6)
BEGIN
1 MEEGGSSHDA ESSKKLGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL
61 VIFSTRGRLY EYANNSVRGT IERYKKACSD AVNPPSVTEA NTQYYQQEAS KLRRQIRDIQ
121 NSNRHIVGES LGSLNFKELK NLEGRLEKGI SRVRSKKNEL LVAEIEYMQK REMELQHNNM
181 YLRAKIAEGA RLNPDQQESS VIQGTTVYES GVSSHDQSQH YNRNYIPVNL LEPNQQFSGQ
241 DQPPLQLV
//