LOCUS AEE79819.1 182 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal L5P family protein protein.
ACCESSION CP002686-8541
PROTEIN_ID AEE79819.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G58700"
/inference="Similar to RNA sequence,
EST:INSD:Z30875.1,INSD:EG486640.1,INSD:DR294407.1,
INSD:DR294399.1,INSD:ES037857.1,INSD:DR294419.1,
INSD:EH949668.1,INSD:DR294387.1,INSD:DR294420.1,
INSD:DR294428.1,INSD:EL245941.1,INSD:ES102209.1,
INSD:DR294405.1,INSD:DR294417.1,INSD:DR294423.1,
INSD:DR294422.1,INSD:DR294418.1,INSD:DR294389.1,
INSD:DR294415.1,INSD:CB258897.1,INSD:DR294403.1,
INSD:DR294426.1,INSD:ES160516.1,INSD:Z29916.1,
INSD:EL199065.1,INSD:DR294432.1,INSD:BP586079.1,
INSD:EG429319.1,INSD:DR294404.1,INSD:ES046771.1,
INSD:BP566635.1,INSD:EL265068.1,INSD:EL098369.1,
INSD:DR294395.1,INSD:BP811048.1,INSD:DR294397.1,
INSD:CF651609.1,INSD:DR294401.1,INSD:EG520875.1,
INSD:CB258899.1,INSD:DR294392.1,INSD:AU226287.1,
INSD:ES125152.1,INSD:ES211750.1,INSD:DR294388.1,
INSD:ES128987.1,INSD:BP633568.1,INSD:AU235560.1,
INSD:DR294398.1,INSD:DR294430.1,INSD:DR294429.1,
INSD:BP624732.1,INSD:EG486639.1,INSD:BP653106.1,
INSD:DR294396.1,INSD:DR294421.1,INSD:ES126238.1,
INSD:BP855558.1,INSD:DR294394.1,INSD:ES058847.1,
INSD:BP648986.1,INSD:EL258576.1,INSD:H76128.1,
INSD:EG522113.1,INSD:EH976759.1,INSD:DR294424.1,
INSD:DR294416.1,INSD:DR294400.1,INSD:DR294427.1,
INSD:DR294406.1,INSD:EG487444.1,INSD:DR294409.1,
INSD:DR294393.1,INSD:DR372208.1,INSD:DR294431.1,
INSD:EL168031.1,INSD:EL164698.1,INSD:DR294391.1,
INSD:DR294425.1,INSD:DR294411.1,INSD:DR294386.1,
INSD:BP866561.1,INSD:BP865280.1,INSD:BP665148.1,
INSD:CB257641.1,INSD:EL182928.1,INSD:EL104348.1,
INSD:CB262612.1,INSD:BP590547.1,INSD:DR294408.1,
INSD:AW004257.1,INSD:CB263738.1,INSD:DR294390.1,
INSD:BP836359.2,INSD:ES029570.1,INSD:EH878915.1,
INSD:DR294402.1,INSD:EG522108.1,INSD:BP591634.1,
INSD:DR294412.1,INSD:ES070576.1,INSD:EG520874.1,
INSD:ES155736.1,INSD:ES140794.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX825712.1,INSD:AY085232.1"
/note="Ribosomal L5P family protein; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translation; LOCATED IN: cytosolic ribosome, cytosolic
large ribosomal subunit, vacuole; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosomal protein L5
(InterPro:IPR002132), Ribosomal protein L5, conserved site
(InterPro:IPR020929), Ribosomal protein L5, N-terminal
(InterPro:IPR020927), Ribosomal protein L5, C-terminal
(InterPro:IPR020928); BEST Arabidopsis thaliana protein
match is: Ribosomal L5P family protein (TAIR:AT5G45775.2);
Has 7854 Blast hits to 7854 proteins in 2814 species:
Archae - 312; Bacteria - 5083; Metazoa - 254; Fungi - 163;
Plants - 278; Viruses - 0; Other Eukaryotes - 1764
(source: NCBI BLink)."
/db_xref="TAIR:AT3G58700"
/db_xref="Araport:AT3G58700"
intron_pos 2:0 (1/4)
intron_pos 38:0 (2/4)
intron_pos 52:1 (3/4)
intron_pos 117:2 (4/4)
BEGIN
1 MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG
61 IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD TGCFGFGIQE HIDLGIKYDP
121 STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI
181 TG
//