LOCUS AEE79803.1 302 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Adaptin ear-binding coat-associated
protein 1 NECAP-1 protein.
ACCESSION CP002686-8523
PROTEIN_ID AEE79803.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G58600"
/inference="Similar to RNA sequence,
EST:INSD:DR327695.1,INSD:DR369967.1,INSD:DR327706.1,
INSD:DR327707.1,INSD:DR327709.1,INSD:ES156936.1,
INSD:EG518807.1,INSD:EG496894.1,INSD:CB264057.1,
INSD:EH920872.1,INSD:EH907428.1,INSD:DR327699.1,
INSD:DR383869.1,INSD:DR327691.1,INSD:BP620885.1,
INSD:EH850044.1,INSD:EG496893.1,INSD:ES091424.1,
INSD:EG496892.1,INSD:ES012396.1,INSD:AV558960.1,
INSD:AV565609.1,INSD:DR327701.1,INSD:AU230698.1,
INSD:DR327703.1,INSD:AV796511.1,INSD:ES117866.1,
INSD:AV561686.1,INSD:DR327694.1,INSD:ES172912.1,
INSD:DR327708.1,INSD:EH885633.1,INSD:DR327692.1,
INSD:CB263550.1,INSD:EL040545.1,INSD:DR327697.1,
INSD:DR327696.1,INSD:BP636718.1,INSD:AV820402.1,
INSD:DR327700.1,INSD:BP662268.1,INSD:EH889335.1,
INSD:DR327704.1,INSD:EG454855.1,INSD:DR327705.1,
INSD:DR327698.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY086716.1,INSD:BT001934.1"
/note="Adaptin ear-binding coat-associated protein 1
NECAP-1; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: endocytosis; LOCATED IN: membrane; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Adaptin ear-binding
coat-associated protein 1 NECAP-1 (InterPro:IPR012466);
BEST Arabidopsis thaliana protein match is: non-intrinsic
ABC protein 4 (TAIR:AT1G03900.1); Has 463 Blast hits to
463 proteins in 142 species: Archae - 0; Bacteria - 2;
Metazoa - 232; Fungi - 69; Plants - 94; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink)."
/db_xref="TAIR:AT3G58600"
/db_xref="Araport:AT3G58600"
intron_pos 47:0 (1/6)
intron_pos 57:2 (2/6)
intron_pos 115:2 (3/6)
intron_pos 126:1 (4/6)
intron_pos 156:2 (5/6)
intron_pos 194:0 (6/6)
BEGIN
1 MDQASSSSTM EEDKKSSTDP VNVDDNEERE AIEIALFQVP ECYVYLIPPR KTAASYRADE
61 WDVNKWAWEG ALKVVSKGEE CIIKLVDKTT GELYAQAFLR EGELHPVEAV IDSSRYFVLR
121 VEEKIDGRVR HAFIGLGFRE RTEAYDFQAA LHDHMKYLNK KKTAEEMEQH YQNTSSVDYS
181 LKEGETIVLQ LKNRSDKDSK SKTVEKSLGN LSLEDKGKSI ETTIPSIILP PPPPGPLSPV
241 TTAQKSPSSL PPSLSLQRSS EQQDLDTKRE EEEEEKKEDL KAKDGGVEDA PDDDFGDFQA
301 AG
//