LOCUS AEE79800.1 646 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana P-loop containing nucleoside triphosphate
hydrolases superfamily protein protein.
ACCESSION CP002686-8519
PROTEIN_ID AEE79800.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G58570"
/inference="Similar to RNA sequence,
EST:INSD:BP861149.1,INSD:BP666068.1,INSD:DR239879.1,
INSD:AV524920.1,INSD:BP575386.1,INSD:DR239880.1,
INSD:ES125620.1,INSD:DR239904.1,INSD:DR239877.1,
INSD:DR239892.1,INSD:ES146066.1,INSD:EL056141.1,
INSD:AV812089.1,INSD:DR239907.1,INSD:AV527041.1,
INSD:ES167661.1,INSD:AV830556.1,INSD:DR239883.1,
INSD:DR239882.1,INSD:ES036494.1,INSD:DR239895.1,
INSD:AV808424.1,INSD:DR239888.1,INSD:ES204626.1,
INSD:DR239902.1,INSD:DR239884.1,INSD:AV826005.1,
INSD:BP565159.1,INSD:DR259409.1,INSD:BP798867.1,
INSD:DR239893.1,INSD:DR239887.1,INSD:DR239896.1,
INSD:AV793242.1,INSD:ES207906.1,INSD:BP598153.1,
INSD:DR370672.1,INSD:ES192354.1,INSD:AV802739.1,
INSD:EH967346.1,INSD:BP590169.1,INSD:DR239894.1,
INSD:DR239905.1,INSD:AV520639.1,INSD:DR239898.1,
INSD:BP665950.1,INSD:ES103476.1,INSD:ES153674.1,
INSD:BP566607.1,INSD:BP570505.1,INSD:DR239885.1,
INSD:DR239891.1,INSD:BP778270.1,INSD:DR239886.1,
INSD:DR239878.1,INSD:DR239901.1,INSD:ES102924.1,
INSD:DR239889.1,INSD:AV557720.1,INSD:BP600075.1,
INSD:DR239876.1,INSD:BP596146.1,INSD:AV518223.1,
INSD:DR239906.1,INSD:BP590978.1,INSD:AV810159.1,
INSD:BP572417.1,INSD:DR239900.1,INSD:DR239903.1,
INSD:DR239890.1,INSD:DR239899.1,INSD:DR239897.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY049285.1,INSD:AY088132.1,INSD:BT002731.1"
/note="P-loop containing nucleoside triphosphate
hydrolases superfamily protein; FUNCTIONS IN: helicase
activity, ATP-dependent helicase activity, ATP binding,
nucleic acid binding; LOCATED IN: chloroplast; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box
type, Q motif (InterPro:IPR014014), DNA/RNA helicase,
DEAD/DEAH box type, N-terminal (InterPro:IPR011545),
DEAD-like helicase, N-terminal (InterPro:IPR014001),
DNA/RNA helicase, C-terminal (InterPro:IPR001650),
Helicase, superfamily 1/2, ATP-binding domain
(InterPro:IPR014021); BEST Arabidopsis thaliana protein
match is: P-loop containing nucleoside triphosphate
hydrolases superfamily protein (TAIR:AT2G42520.1); Has
86488 Blast hits to 59724 proteins in 3531 species: Archae
- 886; Bacteria - 35070; Metazoa - 23291; Fungi - 6787;
Plants - 8100; Viruses - 385; Other Eukaryotes - 11969
(source: NCBI BLink)."
/db_xref="TAIR:AT3G58570"
/db_xref="Araport:AT3G58570"
intron_pos 240:0 (1/5)
intron_pos 268:0 (2/5)
intron_pos 349:0 (3/5)
intron_pos 405:0 (4/5)
intron_pos 443:0 (5/5)
BEGIN
1 MSSNSWADVS ESERAPSGGG WGYSRPSRTN YVPPHLRSRT PSSEFVAPSP GNNDRGGYGG
61 ANSGYGGRGQ GYGGRGSGYG GRGGPVGGWN ARSGGWDRRD TETNPFGNDG NADPAVNEQE
121 NTVINFEAYE DIPIETSGDN VPPPVNTFAE IDLGEALNLN IQRCKYVKPT PVQRNAIPIL
181 AAGRDLMACA QTGSGKTAAF CFPIISGIMK DQHIERPRGV RGVYPLAVIL SPTRELACQI
241 HDEARKFSYQ TGVKVVVAYG GTPVNQQIRE LERGVDILVA TPGRLNDLLE RGRVSLQMVR
301 FLALDEADRM LDMGFEPQIR KIVQQMDMPP PGVRQTMLFS ATFPREIQRL ASDFLSNYIF
361 LAVGRVGSST DLIVQRVEFV HDSDKRSHLM DLLHAQRENG NQGKQALTLV FVETKKGADS
421 LENWLCINGF PATTIHGDRS QQEREVALRS FKTGRTPILV ATDVAARGLD IPHVAHVVNF
481 DLPNDIDDYV HRIGRTGRAG NSGLATAFFN DNNTTMAKPL AELMQEANQE VPDWLTRYAS
541 RASFGGGKNR RSGGRFGGRD FRRESFSRGG GGADYYGGGG GYGGVPGGGY GAMPGGYGPV
601 PGGGYGNVPG GGYAPYGRGG GAYYGPGGYG TVPNQGYGPG VASAWD
//