LOCUS AEE79795.1 406 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ubiquitin carboxyl-terminal hydrolase
family protein protein.
ACCESSION CP002686-8513
PROTEIN_ID AEE79795.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G58520"
/inference="Similar to RNA sequence,
EST:INSD:AV440313.1,INSD:BP829573.1,INSD:AV534889.1,
INSD:DR379583.1,INSD:DR379466.1,INSD:ES116313.1,
INSD:AV799499.1,INSD:EL972794.1,INSD:BP652144.1,
INSD:BP828550.1,INSD:AV547822.1,INSD:AV792305.1,
INSD:BP592357.1,INSD:BP646820.1,INSD:ES149046.1,
INSD:EL995517.1,INSD:BP640717.1,INSD:BP646956.1,
INSD:DR376800.1,INSD:AV813836.1,INSD:CD531740.1"
/note="Ubiquitin carboxyl-terminal hydrolase family
protein; CONTAINS InterPro DOMAIN/s: RNA recognition
domain, plant (InterPro:IPR021099); BEST Arabidopsis
thaliana protein match is: Ubiquitin carboxyl-terminal
hydrolase family protein (TAIR:AT5G48040.1); Has 412 Blast
hits to 406 proteins in 16 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 412; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G58520"
/db_xref="Araport:AT3G58520"
intron_pos 67:1 (1/2)
intron_pos 81:2 (2/2)
BEGIN
1 MFVKSQSFLF SVSKLFHQHQ QWRGMGAMTK VRLKWVKNKN LDHVIDTETD LKAACILKDA
61 IKRSPTGITI RENFNCYWNK RYPTLFHEFP HARYASLPCF KLTDTALMLD SQEEIIHQSH
121 EADTVERLCR VLMMMRSKTV SLRSLHSLKF DLGLPDNYEK TLVMKYPDHF CFVKASNGNP
181 CLKLVKWRDE FAFSALQKRN EDNDVSGEES RYREFKRGQS TLTFPMSFPR GYGAQKKVKA
241 WMDEFQKLPY ISPYDDPSNI DPESDLMEKR AVAVLHELLS LTIHKKTKRN YLRSMRAELN
301 IPHKFTRLFT RYPGIFYLSL KCKTTTVILK EGYRRGKLVD PHPLTRLRDK FYHVMRTGFL
361 YRARGLGMVS KEELLLDRPE DDLEEEGSEE EEIVEGSELE EDSEAE
//