LOCUS AEE79791.1 612 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DEA(D/H)-box RNA helicase family
protein protein.
ACCESSION CP002686-8510
PROTEIN_ID AEE79791.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G58510"
/inference="Similar to RNA sequence,
EST:INSD:DR296848.1,INSD:AV440313.1,INSD:ES077109.1,
INSD:AV534889.1,INSD:EH955234.1,INSD:ES054009.1,
INSD:DR250257.1,INSD:EG459803.1,INSD:BP592357.1,
INSD:AV546760.1,INSD:ES149046.1,INSD:ES213776.1,
INSD:CD531740.1,INSD:DR379583.1,INSD:ES202333.1,
INSD:DR379466.1,INSD:CB255851.1,INSD:CK119070.1,
INSD:BP561472.2,INSD:BP652144.1,INSD:ES115367.1,
INSD:EL107195.1,INSD:ES191313.1,INSD:EL984599.1,
INSD:BP612587.1,INSD:ES152655.1,INSD:AV547822.1,
INSD:AV792305.1,INSD:EH797769.1,INSD:ES120405.1,
INSD:T75876.1,INSD:DR376800.1,INSD:ES031146.1,
INSD:DR250258.1,INSD:AV546769.1,INSD:T44044.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY088091.1,INSD:AY114637.1,INSD:AJ010463.1,
INSD:AY062446.1"
/note="DEA(D/H)-box RNA helicase family protein; FUNCTIONS
IN: helicase activity, ATP-dependent helicase activity,
ATP binding, nucleic acid binding; LOCATED IN: nucleolus,
peroxisome, plasma membrane; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif
(InterPro:IPR014014), DNA/RNA helicase, DEAD/DEAH box
type, N-terminal (InterPro:IPR011545), DEAD-like helicase,
N-terminal (InterPro:IPR014001), DNA/RNA helicase,
C-terminal (InterPro:IPR001650), Helicase, superfamily
1/2, ATP-binding domain (InterPro:IPR014021); BEST
Arabidopsis thaliana protein match is: P-loop containing
nucleoside triphosphate hydrolases superfamily protein
(TAIR:AT2G42520.1); Has 89639 Blast hits to 57959 proteins
in 3433 species: Archae - 859; Bacteria - 32130; Metazoa -
25406; Fungi - 6817; Plants - 10992; Viruses - 755; Other
Eukaryotes - 12680 (source: NCBI BLink)."
/db_xref="TAIR:AT3G58510"
/db_xref="Araport:AT3G58510"
intron_pos 245:0 (1/5)
intron_pos 273:0 (2/5)
intron_pos 354:0 (3/5)
intron_pos 408:0 (4/5)
intron_pos 446:0 (5/5)
BEGIN
1 MSASWADVAD SEKAVSQSKP PYVPPHLRNR PSEPVAAPLP QNDHAGYGGQ PAGSRWAPPS
61 SGGGGASGGG YRNDGGRTGY GYGAGGGGGG GGGWNNRSGG WDRREREVNP FGDDAELEPV
121 FTEQENTGIN FDAYEDIPVE TSGGDVPPPV NTFADIDLGD ALNLNIRRCK YVRPTPVQRH
181 AIPILLAERD LMACAQTGSG KTAAFCFPII SGIMKDQHVE RPRGSRAVYP FAVILSPTRE
241 LACQIHDEAK KFSYQTGVKV VVAYGGTPIH QQLRELERGC DILVATPGRL NDLLERARVS
301 MQMIRFLALD EADRMLDMGF EPQIRKIVEQ MDMPPRGVRQ TMLFSATFPS QIQRLAADFM
361 SNYIFLAVGR VGSSTDLITQ RVEFVQESDK RSHLMDLLHA QRETQDKQSL TLVFVETKRG
421 ADTLENWLCM NEFPATSIHG DRTQQEREVA LRSFKTGRTP ILVATDVAAR GLDIPHVAHV
481 VNFDLPNDID DYVHRIGRTG RAGKSGIATA FFNENNAQLA RSLAELMQEA NQEVPEWLTR
541 YASRASFGGG KKRSGGRFGG RDFRREGSYS RGGGGGGGGG GSDYYGGGGY GGGGYGGAPS
601 GGYGAGVTSA WD
//