LOCUS AEE79784.1 403 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RHOMBOID-like protein 15 protein.
ACCESSION CP002686-8504
PROTEIN_ID AEE79784.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="RBL15"
/locus_tag="AT3G58460"
/gene_synonym="ARABIDOPSIS RHOMBOID-LIKE PROTEIN 11"
/gene_synonym="ATRBL11"
/gene_synonym="ATRBL15"
/gene_synonym="RBL11"
/gene_synonym="rhomboid-like protein 11"
/gene_synonym="RHOMBOID-like protein 15"
/inference="Similar to RNA sequence,
EST:INSD:ES094762.1,INSD:EL167686.1,INSD:EL222930.1,
INSD:EL242276.1,INSD:EH932777.1,INSD:EH862482.1,
INSD:ES072536.1,INSD:DR201986.1,INSD:ES158284.1,
INSD:EL278467.1,INSD:EH836626.1,INSD:BP849855.1,
INSD:DR201980.1,INSD:ES164384.1,INSD:N65296.1,
INSD:BP668883.1,INSD:EH905515.1,INSD:EH953762.1,
INSD:EH844280.1,INSD:AV828456.1,INSD:EL140470.1,
INSD:DR201987.1,INSD:EL246986.1,INSD:EL003819.1,
INSD:EH937020.1,INSD:ES018187.1,INSD:EL208214.1,
INSD:DR201981.1,INSD:BP862191.2,INSD:DR201988.1,
INSD:ES007381.1,INSD:EH961266.1,INSD:ES086610.1,
INSD:DR201983.1,INSD:EH895687.1,INSD:DR201985.1,
INSD:BP565744.1,INSD:DR201984.1,INSD:BP633342.1,
INSD:AV562350.1,INSD:BP661551.1,INSD:ES041058.1,
INSD:EH806817.1,INSD:DR201982.1,INSD:AV801476.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT000186.1,INSD:AY087480.1,INSD:BX824651.1,
INSD:BX824748.1,INSD:BX823012.1,INSD:BX825837.1,
INSD:AY136386.1,INSD:BX823572.1"
/note="RHOMBOID-like protein 15 (RBL15); CONTAINS InterPro
DOMAIN/s: Ubiquitin-associated/translation elongation
factor EF1B, N-terminal (InterPro:IPR000449),
Ubiquitin-associated/translation elongation factor EF1B,
N-terminal, eukaryote (InterPro:IPR015940), UBA-like
(InterPro:IPR009060); BEST Arabidopsis thaliana protein
match is: RHOMBOID-like protein 14 (TAIR:AT3G17611.1); Has
3199 Blast hits to 3199 proteins in 1221 species: Archae -
73; Bacteria - 2108; Metazoa - 163; Fungi - 156; Plants -
314; Viruses - 3; Other Eukaryotes - 382 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G58460"
/db_xref="Araport:AT3G58460"
intron_pos 9:0 (1/12)
intron_pos 64:1 (2/12)
intron_pos 165:2 (3/12)
intron_pos 176:2 (4/12)
intron_pos 207:1 (5/12)
intron_pos 232:0 (6/12)
intron_pos 263:2 (7/12)
intron_pos 287:0 (8/12)
intron_pos 343:2 (9/12)
intron_pos 358:0 (10/12)
intron_pos 378:0 (11/12)
intron_pos 403:0 (12/12)
BEGIN
1 MRPNIVTEAG VQTRVGQWWN AIPFLTSSVV VVCGVIYLIC LLTGYDTFYE VCFLPSAIIS
61 RFQVYRFYTA IIFHGSLLHV LFNMMALVPM GSELERIMGS VRLLYLTVLL ATTNAVLHLL
121 IASLAGYNPF YQYDHLMNEC AIGFSGILFS MIVIETSLSG VTSRSVFGLF NVPAKLYPWI
181 LLIVFQLLMT NVSLLGHLCG ILSGFSYSYG LFNFLMPGSS FFTTIESASW MSSFIRRPKF
241 IMCTGGNPSS YIPTYSAQNT TSSGFSTGNA WRSLSSWLPQ REASNQSSED SRFPGRGRTL
301 STARDPTAPA GETDPNLHAR LLEDSSSPDR LSDATVNTVA DSRQAPIANA AVLPQSQGRV
361 AASEEQIQKL VAMGFDRTQV EVALAAADDD LTVAVEILMS QQA
//