LOCUS AEE79781.1 601 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TRAF-like superfamily protein protein.
ACCESSION CP002686-8500
PROTEIN_ID AEE79781.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G58440"
/note="TRAF-like superfamily protein; CONTAINS InterPro
DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH
(InterPro:IPR002083); BEST Arabidopsis thaliana protein
match is: TRAF-like family protein (TAIR:AT3G58410.1); Has
1621 Blast hits to 1160 proteins in 208 species: Archae -
7; Bacteria - 111; Metazoa - 174; Fungi - 133; Plants -
925; Viruses - 9; Other Eukaryotes - 262 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G58440"
/db_xref="Araport:AT3G58440"
intron_pos 37:2 (1/6)
intron_pos 89:1 (2/6)
intron_pos 306:0 (3/6)
intron_pos 426:2 (4/6)
intron_pos 463:1 (5/6)
intron_pos 505:0 (6/6)
BEGIN
1 MSLDLKMQDK FTWVLEKFSS LKDQCYSPVF TVAGCNWRLL SFLKGAKNDR YFSVYLDLEP
61 GSLPPGWRRE VKFSITLDNV CPNTDRVLGG PCFFDAKSNI WGFQDFLLLE KLVNIAEGFL
121 VNDRLTIVAE VDVLPSIVVP LEPVKIISSQ EKLDDDDDDC DDASEESSDD GDASQEYTDD
181 NDDEVCDISR LNLVNAIENA FYTSIRSCNS LVAETEVSND ENDDAPKKDV DDEASSLVLN
241 DSARNGSSIE QVKKTRLHLV LEDASRGRDP NTVACVTETC DYVLMEIQSD KETVDINGFV
301 VVSSKAESVR RILERHPDIS VEFRGKNQQL RNACMNFLLS LIETMCQSLE ELSNEDLVEA
361 DVALTYLRDA GFKVDWLEKK LDQLKEKKEE EMSGLARLHE IEENLVILKQ KWSDLGALAE
421 KEKADFVASK TEVSNNENDY ANKEDVDDEA SSLVWTDSAR DTKTGGKAFN NVASVAETSN
481 NVLTEIPPAK ETTDVNGFEV FMSQTKLDEV SRKKKMEQGS GPRLQTMEER LQKLKLLFVD
541 LESQLQKEKV EALVARAPLS FNDGVCRFSG FCGFVGESLF SYAWKQGPSL YSLSFMSNGT
601 E
//