LOCUS AEE79755.1 351 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TRAF-like family protein protein.
ACCESSION CP002686-8468
PROTEIN_ID AEE79755.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G58220"
/inference="Similar to RNA sequence,
EST:INSD:EH833408.1,INSD:AV822847.1,INSD:BP796408.1,
INSD:EH992841.1,INSD:CB255201.1,INSD:EH856023.1,
INSD:DR372590.1,INSD:AV783704.1,INSD:EL092077.1,
INSD:ES066703.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY054615.1,INSD:BX822189.1,INSD:BT006532.1"
/note="TRAF-like family protein; CONTAINS InterPro
DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH
(InterPro:IPR002083); BEST Arabidopsis thaliana protein
match is: Arabidopsis phospholipase-like protein (PEARLI
4) with TRAF-like domain (TAIR:AT3G58270.2); Has 43233
Blast hits to 11874 proteins in 1028 species: Archae - 67;
Bacteria - 21678; Metazoa - 7333; Fungi - 1846; Plants -
1609; Viruses - 309; Other Eukaryotes - 10391 (source:
NCBI BLink)."
/db_xref="TAIR:AT3G58220"
/db_xref="Araport:AT3G58220"
intron_pos 40:2 (1/2)
intron_pos 94:1 (2/2)
BEGIN
1 MGRIGSPLGK NEFSWVIKDF SSLGVRAIYS DEFVIGGCKW RLIAYPMGNR IKKYMSLYVE
61 VADSKHLPSG WSINTELRME VVNHNLYKPS QQKYRKNLWF DQKTPSWGYK TMIRHSKLSG
121 EEGFLVSGEV TIVVKIDVYR VFGKVAAIEI SEEGSKEGYE YESEEVYKKE SEEGYKYESE
181 EDYEKRPIER FEYESEAESK KDYEERTRGG FEYESEPVSK KDYEERPRES FEYESEAESK
241 KDSEEGSRER YEYESEEESK KDSENDCGEE SEKDSEEGSR PLKKIKRNDD GVKSNDSVNK
301 TQQVKETMDI NGFQVLPSQV SGNFKLLRHC YHLTLVDFGT KGVTLLNTEK M
//