LOCUS AEE79747.1 429 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana phenylalanyl-tRNA synthetase class
IIc family protein protein.
ACCESSION CP002686-8452
PROTEIN_ID AEE79747.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G58140"
/inference="Similar to RNA sequence,
EST:INSD:AV817818.1,INSD:EL086560.1,INSD:EL977930.1,
INSD:EL204277.1,INSD:ES006084.1,INSD:AV814894.1,
INSD:EG511493.1,INSD:EL175525.1,INSD:BP616247.1,
INSD:AV787492.1,INSD:AV821711.1,INSD:BP583105.1,
INSD:BU635173.1,INSD:DR260644.1,INSD:DR260640.1,
INSD:DR260637.1,INSD:BP604490.1,INSD:EG465156.1,
INSD:DR260642.1,INSD:EH852931.1,INSD:ES033950.1,
INSD:DR362694.1,INSD:BP649475.1,INSD:BP591851.1,
INSD:BP836111.1,INSD:AV810654.1,INSD:DR260648.1,
INSD:BE845364.1,INSD:EL193019.1,INSD:EG453836.1,
INSD:EL269462.1,INSD:DR260639.1,INSD:AI996098.1,
INSD:EL082710.1,INSD:EH841070.1,INSD:BP794752.1,
INSD:BP577329.1,INSD:EL138264.1,INSD:ES093509.1,
INSD:AV819254.1,INSD:DR260641.1,INSD:EL016156.1,
INSD:EH984342.1,INSD:BP851315.1,INSD:AV812310.1,
INSD:EG527754.1,INSD:DR260645.1,INSD:EG527756.1,
INSD:AV784451.1,INSD:EG465155.1,INSD:BP607093.1,
INSD:ES078414.1,INSD:AV820906.1,INSD:AV810710.1,
INSD:BP573594.1,INSD:ES002260.1,INSD:AV792337.1,
INSD:DR260636.1,INSD:ES023792.1,INSD:BP657704.1,
INSD:BP570661.1,INSD:AV782578.1,INSD:CF773481.1,
INSD:EH979691.1,INSD:EL277913.1,INSD:BP576911.1,
INSD:EH946223.1,INSD:AV799143.1,INSD:BP654027.1,
INSD:BP567201.1,INSD:AV782244.1,INSD:DR260646.1,
INSD:EH889717.1,INSD:DR260638.1,INSD:BP861393.1,
INSD:ES097150.1,INSD:ES162912.1,INSD:BP621739.1,
INSD:DR260647.1,INSD:EL191771.1,INSD:BP576747.1,
INSD:EG511492.1,INSD:DR260643.1,INSD:EL077888.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY063063.1,INSD:BX824181.1,INSD:BX822295.1,
INSD:AY085373.1,INSD:BX822231.1,INSD:BX826121.1,
INSD:AF370247.1"
/note="phenylalanyl-tRNA synthetase class IIc family
protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: tRNA
processing, phenylalanyl-tRNA aminoacylation, translation,
tRNA aminoacylation, tRNA aminoacylation for protein
translation; LOCATED IN: mitochondrion, chloroplast,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Phenylalanyl-tRNA synthetase, class IIc, mitochondrial
(InterPro:IPR004530), Phenylalanyl-tRNA synthetase, beta
subunit, ferrodoxin-fold anticodon-binding
(InterPro:IPR005121), Phenylalanyl-tRNA synthetase alpha
chain (InterPro:IPR002319), Aminoacyl-tRNA synthetase,
class II, conserved domain (InterPro:IPR006195); BEST
Arabidopsis thaliana protein match is: phenylalanyl-tRNA
synthetase, putative / phenylalanine--tRNA ligase,
putative (TAIR:AT4G39280.1); Has 12112 Blast hits to 12078
proteins in 3125 species: Archae - 246; Bacteria - 7816;
Metazoa - 323; Fungi - 290; Plants - 111; Viruses - 0;
Other Eukaryotes - 3326 (source: NCBI BLink)."
/db_xref="TAIR:AT3G58140"
/db_xref="Araport:AT3G58140"
intron_pos 66:1 (1/9)
intron_pos 131:0 (2/9)
intron_pos 200:0 (3/9)
intron_pos 239:1 (4/9)
intron_pos 265:0 (5/9)
intron_pos 325:0 (6/9)
intron_pos 340:0 (7/9)
intron_pos 375:0 (8/9)
intron_pos 414:0 (9/9)
BEGIN
1 MTVFSVQSTI FSRASVALLS SNGFKRFSFV SSFSSSAAYS PPKMRKRRYP IVSAVDIGGV
61 AIARNDVVRE DDPTNNVPDS IFSKLGMQLH RRDKHPIGIL KNAIYDYFDS NYSNKFEKFE
121 DLSPIVTTKQ NFDDVLVPAD HVSRSLNDTY YVDSQTVLRC HTSAHQAELL RKGHSRFLVT
181 GDVYRRDSID STHYPVFHQM EGFCVFSPED WNGSGKDSTL YAAEDLKKCL EGLARHLFGS
241 VEMRWVDTYF PFTNPSFELE IYFKEDWLEV LGCGVTEQVI LKQSGLENNV AWAFGLGLER
301 LAMVLFDIPD IRFFWSSDER FTSQFGKGEL GVKFKPYSKY PPCYKDISFW ISDLFTENNF
361 CEVVRGIAGD LVEEVKLIDQ FTNKKKGLTS HCYRIVFRSM ERSLTDEEVN DLQSKVRDEV
421 QKKLNVELR
//