LOCUS AEE79735.1 308 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana seven in absentia of Arabidopsis 2 protein.
ACCESSION CP002686-8436
PROTEIN_ID AEE79735.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SINAT2"
/locus_tag="AT3G58040"
/gene_synonym="seven in absentia of Arabidopsis 2"
/inference="Similar to RNA sequence,
EST:INSD:EL329411.1,INSD:ES158965.1,INSD:ES082474.1,
INSD:ES040978.1,INSD:BP819688.1,INSD:EL161927.1,
INSD:EL091104.1,INSD:EL104735.1,INSD:BP825319.1,
INSD:DR376179.1,INSD:AV551338.1,INSD:BP600489.1,
INSD:BP640584.1,INSD:BP819609.1,INSD:EH940287.1,
INSD:EH909726.1,INSD:AU229256.1,INSD:AV538999.1,
INSD:EH892528.1,INSD:EH813275.1,INSD:CF652587.1,
INSD:DR249488.1,INSD:EL133995.1,INSD:AI997661.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY087768.1,INSD:BX822890.1,INSD:BT025655.1"
/note="seven in absentia of Arabidopsis 2 (SINAT2);
FUNCTIONS IN: protein binding; INVOLVED IN: multicellular
organismal development, protein ubiquitination,
ubiquitin-dependent protein catabolic process; LOCATED IN:
nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
TRAF-like (InterPro:IPR008974), Seven-in-absentia protein,
TRAF-like domain (InterPro:IPR018121), Zinc finger,
RING-type (InterPro:IPR001841), Zinc finger, SIAH-type
(InterPro:IPR013010), Seven In Absentia Homolog-type
(InterPro:IPR013323), Seven-in-absentia protein, sina
(InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST
Arabidopsis thaliana protein match is: Protein with
RING/U-box and TRAF-like domains (TAIR:AT2G41980.1); Has
1862 Blast hits to 1847 proteins in 701 species: Archae -
0; Bacteria - 0; Metazoa - 1276; Fungi - 4; Plants - 482;
Viruses - 0; Other Eukaryotes - 100 (source: NCBI BLink)."
/db_xref="TAIR:AT3G58040"
/db_xref="Araport:AT3G58040"
intron_pos 74:0 (1/2)
intron_pos 203:0 (2/2)
BEGIN
1 MAPGGSALKE VMESNSTGMD YEVKTAKVEV NNNKPTKPGS AGIGKYGIHS NNGVYELLEC
61 PVCTNLMYPP IHQCPNGHTL CSNCKLRVQN TCPTCRYELG NIRCLALEKV AESLEVPCRY
121 QNLGCHDIFP YYSKLKHEQH CRFRPYTCPY AGSECSVTGD IPTLVVHLKD DHKVDMHDGC
181 TFNHRYVKSN PHEVENATWM LTVFNCFGRQ FCLHFEAFQL GMAPVYMAFL RFMGDENEAK
241 KFSYSLEVGA HGRKLTWQGI PRSIRDSHRK VRDSQDGLII PRNLALYFSG GDRQELKLRV
301 TGRIWKEE
//