LOCUS AEE79732.1 436 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002686-8432
PROTEIN_ID AEE79732.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G58030"
/inference="Similar to RNA sequence,
EST:INSD:EH868739.1,INSD:AV820368.1,INSD:AV819597.1,
INSD:BP581120.1,INSD:AV819305.1,INSD:EL080950.1,
INSD:EH912846.1,INSD:EH905362.1,INSD:EL140311.1,
INSD:EL207971.1,INSD:AV819164.1,INSD:EL050485.1,
INSD:ES186207.1,INSD:EL309163.1,INSD:ES087284.1,
INSD:AV819643.1,INSD:DR379757.1,INSD:ES042901.1,
INSD:EL197370.1,INSD:ES062848.1,INSD:EL084291.1,
INSD:AA585829.1,INSD:EL169024.1,INSD:AV820920.1,
INSD:EH968870.1,INSD:AV820749.1,INSD:ES051678.1,
INSD:ES101524.1,INSD:AI994878.1,INSD:BP575459.1,
INSD:EH842954.1,INSD:T22787.1,INSD:ES142213.1,
INSD:EL146308.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX824379.1,INSD:BX824120.1,INSD:BT006585.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger,
RING-type, conserved site (InterPro:IPR017907), Zinc
finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana
protein match is: RING/U-box superfamily protein
(TAIR:AT2G42030.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="TAIR:AT3G58030"
/db_xref="Araport:AT3G58030"
BEGIN
1 MGEELADTMN LDLNLGPGPE SDLQPAPNET VNLADWTNDP PERSSEAVTR IRTRHRTRFR
61 QLNLPIPVLS ETHTMAIELN QLMGNSVNRA AMQTGEGSER GNEDLKMCEN GDGALGDGVL
121 DKKADVEKSS GSDGNFFDCN ICLDLSKEPV LTCCGHLYCW PCLYQWLQIS DAKECPVCKG
181 EVTSKTVTPI YGRGNHKREI EESLDTKVPM RPHARRIESL RNTIQRSPFT IPMEEMIRRI
241 QNRFDRDSTP VPDFSNREAS ERVNDRANSI LNRLMTSRGV RSEQNQASAA AAAIVAASED
301 IDLNPNIAPD LEGESNTRFH PLLIRRQLQS HRVARISTFT SALSSAERLV DAYFRTHPLG
361 RNHQEQNHHA PVVVDDRDSF SSIAAVINSE SQVDTAVEID SMALSTSSSR RRNENGSRVS
421 DVDSADSRPP RRRRFT
//