LOCUS AEE79714.1 609 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tubulin binding cofactor C domain-
containing protein protein.
ACCESSION CP002686-8412
PROTEIN_ID AEE79714.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G57890"
/note="Tubulin binding cofactor C domain-containing
protein; FUNCTIONS IN: binding; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CARP
motif (InterPro:IPR006599), C-CAP/cofactor C-like domain
(InterPro:IPR017901), Tubulin binding cofactor C
(InterPro:IPR012945); BEST Arabidopsis thaliana protein
match is: C-CAP/cofactor C-like domain-containing protein
(TAIR:AT2G42230.2)."
/db_xref="TAIR:AT3G57890"
/db_xref="Araport:AT3G57890"
intron_pos 170:0 (1/9)
intron_pos 206:0 (2/9)
intron_pos 253:0 (3/9)
intron_pos 378:0 (4/9)
intron_pos 413:0 (5/9)
intron_pos 460:0 (6/9)
intron_pos 528:0 (7/9)
intron_pos 559:0 (8/9)
intron_pos 596:1 (9/9)
BEGIN
1 MTEEQDLIDQ SPPPSAPDPE PNSSTNPNSV IHPRRVSFEH GLLPIQKLVF TDPIQTLAPV
61 KQKLADAASN NRVGSAAIAD VLQISGDHAR LVLETLGSVL HSESDPLVRA KPEEVDSVGA
121 DLRDLILFLY IQSYKKLLPR THKDSAAVAD VWPSTSAFDG YLSALSPIQS CNILFPVWYG
181 CSIESFRKQS YNLKLFSVFY SHCSLLVRSN SRRFMPSQAD DEAHQLSYLQ KHLANIISLL
241 AEPVEGEGDE SLVFSMEAFE HLRFLVQFGD KGSDVSPLSQ ATPFFANSDP DMPAVPVPAS
301 QVHDWLLQNI ASALESITER ISGKENGPSN DQDDAMSDVC AAPNKVAPST RGPCLIEGVS
361 KTSLVKQASD LRGRSVKVVN CHDSVIYLLA PLRYATVHGC SDTTIVLGAV GKAIKVEHCE
421 RVHVIVAAKR VCIANCRECV FFLGVNQRPL IVGDNHKLQV APYNTFYSHL EEHMREVGLE
481 PTINKWDKPL ALGAVDPHDS LSHPAGVADA QAESAASVDP DQFVNFLIPN WFSGAELGST
541 KDNPFPLPDA YMAAQQRNLK NFEETRRSLK EAPLEENRKR ELSSALHVYF KDWLYASGNI
601 RQLYCLQGD
//