LOCUS AEE79665.1 773 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana seed imbibition 2 protein.
ACCESSION CP002686-8342
PROTEIN_ID AEE79665.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SIP2"
/locus_tag="AT3G57520"
/gene_synonym="AtSIP2"
/gene_synonym="raffinose synthase 2"
/gene_synonym="RS2"
/gene_synonym="seed imbibition 2"
/inference="Similar to RNA sequence,
EST:INSD:BP668471.1,INSD:BP562418.2,INSD:ES152938.1,
INSD:ES047908.1,INSD:AV786700.1,INSD:CB256584.1,
INSD:EH877625.1,INSD:DR281222.1,INSD:AV794447.1,
INSD:DR281192.1,INSD:AV524759.1,INSD:AV814043.1,
INSD:ES127502.1,INSD:BE520651.1,INSD:AV534463.1,
INSD:AV518158.1,INSD:DR281237.1,INSD:AV531715.1,
INSD:EL126973.1,INSD:BE521777.1,INSD:BP664259.1,
INSD:BE521776.1,INSD:AV794602.1,INSD:DR281202.1,
INSD:BP814858.1,INSD:AV566152.1,INSD:DR368105.1,
INSD:AV802689.1,INSD:EH948854.1,INSD:DR281235.1,
INSD:DR281211.1,INSD:AV811588.1,INSD:AV795746.1,
INSD:BE526735.1,INSD:EH963965.1,INSD:ES068200.1,
INSD:DR281214.1,INSD:DR281213.1,INSD:ES135313.1,
INSD:BP779282.1,INSD:BE528340.1,INSD:AV817550.1,
INSD:BP835501.1,INSD:AV541615.1,INSD:AV817440.1,
INSD:DR368110.1,INSD:BP838108.1,INSD:DR281216.1,
INSD:AV794723.1,INSD:BP839391.1,INSD:EH869165.1,
INSD:BP794860.1,INSD:AV812661.1,INSD:ES127944.1,
INSD:AV828758.1,INSD:BP646401.1,INSD:BP649754.1,
INSD:AV555370.1,INSD:AV794225.1,INSD:AV796011.1,
INSD:AV797778.1,INSD:T45364.1,INSD:BP791099.1,
INSD:DR281253.1,INSD:DR281210.1,INSD:CB185506.1,
INSD:AV810504.1,INSD:AV813106.1,INSD:AV799740.1,
INSD:CB255937.1,INSD:AV795923.1,INSD:BP788502.1,
INSD:AV782749.1,INSD:BP860926.1,INSD:DR368104.1,
INSD:BE520652.1,INSD:CB257840.1,INSD:DR281209.1,
INSD:ES076476.1,INSD:ES066839.1,INSD:DR281195.1,
INSD:BE523431.1,INSD:DR281176.1,INSD:CB256449.1,
INSD:DR281197.1,INSD:CB185803.1,INSD:AV795637.1,
INSD:CB257282.1,INSD:DR281185.1,INSD:DR281223.1,
INSD:AV817964.1,INSD:CK121548.1,INSD:BP840891.1,
INSD:DR281212.1,INSD:EG448656.1,INSD:EL319691.1,
INSD:DR281186.1,INSD:BP865006.1,INSD:BP794676.1,
INSD:AV527983.1,INSD:BP865195.1,INSD:DR281191.1,
INSD:AV532413.1,INSD:CB074293.1,INSD:AV795825.1,
INSD:EG448639.1,INSD:ES101842.1,INSD:BE520653.1,
INSD:BP560708.1,INSD:BP788314.1,INSD:EL997813.1,
INSD:DR368113.1,INSD:BP642990.1,INSD:DR281221.1,
INSD:AV809544.1,INSD:EL020984.1,INSD:BP840161.1,
INSD:BP840816.1,INSD:DR281196.1,INSD:AV813706.1,
INSD:DR281193.1,INSD:BP849677.1,INSD:EL037920.1,
INSD:AV794059.1,INSD:N96982.1,INSD:DR281184.1,
INSD:DR281178.1,INSD:BE522564.1,INSD:DR281241.1,
INSD:DR281181.1,INSD:AV809785.1,INSD:BP781488.1,
INSD:DR281234.1,INSD:DR281189.1,INSD:BP784660.1,
INSD:BP840426.1,INSD:EH980407.1,INSD:W43044.1,
INSD:BP827617.1,INSD:BP847811.2,INSD:DR281238.1,
INSD:DR281250.1,INSD:BP669960.1,INSD:DR281228.1,
INSD:EL075634.1,INSD:BP620519.1,INSD:BP820173.1,
INSD:DR281251.1,INSD:EG436473.1,INSD:DR281243.1,
INSD:DR281246.1,INSD:BP866532.1,INSD:BP842637.1,
INSD:AI995160.1,INSD:ES152217.1,INSD:DR281205.1,
INSD:AV789873.1,INSD:BE522565.1,INSD:AV794590.1,
INSD:DR281183.1,INSD:AV815621.1,INSD:AV784396.1,
INSD:DR281207.1,INSD:BE523463.1,INSD:BP664082.1,
INSD:EH980342.1,INSD:DR281231.1,INSD:BP785262.1,
INSD:DR281252.1,INSD:BE037811.1,INSD:DR281175.1,
INSD:AV792060.1,INSD:DR368109.1,INSD:DR281254.1,
INSD:AV816139.1,INSD:CB255758.1,INSD:DR281219.1,
INSD:CB257284.1,INSD:DR281220.1,INSD:BP562282.2,
INSD:CK120316.1,INSD:DR281217.1,INSD:DR281188.1,
INSD:AV812213.1,INSD:BP790649.1,INSD:AV809794.1,
INSD:EH983073.1,INSD:EH985797.1,INSD:DR281180.1,
INSD:DR281179.1,INSD:BP826494.1,INSD:BP779785.1,
INSD:DR281203.1,INSD:DR368108.1,INSD:T44731.1,
INSD:AV812208.1,INSD:AV819098.1,INSD:AV549889.1,
INSD:DR281200.1,INSD:BP588568.1,INSD:DR368102.1,
INSD:DR368112.1,INSD:DR281204.1,INSD:CB074306.1,
INSD:CB258696.1,INSD:DR281248.1,INSD:AV522989.1,
INSD:AV795223.1,INSD:BP866764.1,INSD:DR281182.1,
INSD:H77011.1,INSD:EL021499.1,INSD:BE522839.1,
INSD:AV794258.1,INSD:CB258974.1,INSD:AV559108.1,
INSD:DR281236.1,INSD:EL032835.1,INSD:BP838542.1,
INSD:AV563087.1,INSD:AV786989.1,INSD:DR281249.1,
INSD:Z37479.1,INSD:DR355761.1,INSD:BP780327.1,
INSD:DR281239.1,INSD:DR281255.1,INSD:T44838.1,
INSD:AV532093.1,INSD:EL021453.1,INSD:DR281240.1,
INSD:AV793746.1,INSD:AV547461.1,INSD:DR355762.1,
INSD:AV540021.1,INSD:EL967734.1,INSD:DR281226.1,
INSD:Z37176.1,INSD:BP637186.1,INSD:DR281190.1,
INSD:DR281229.1,INSD:DR281224.1,INSD:BE530466.1,
INSD:DR281242.1,INSD:ES164340.1,INSD:AV806956.1,
INSD:BP637856.1,INSD:DR281218.1,INSD:AV813614.1,
INSD:DR281215.1,INSD:EL197128.1,INSD:BP840954.1,
INSD:BP866757.1,INSD:DR281194.1,INSD:DR368106.1,
INSD:DR368103.1,INSD:DR281233.1,INSD:DR281244.1,
INSD:CB256884.1,INSD:AV813137.1,INSD:ES084855.1,
INSD:AV803779.1,INSD:EG448655.1,INSD:DR281225.1,
INSD:EL182645.1,INSD:DR281199.1,INSD:BP644090.1,
INSD:DR368111.1,INSD:AV545156.1,INSD:DR281208.1,
INSD:AV811947.1,INSD:DR281201.1,INSD:AV798910.1,
INSD:BP561558.1,INSD:ES137772.1,INSD:AV794675.1,
INSD:DR281232.1,INSD:BE037986.1,INSD:EL050275.1,
INSD:AA728680.1,INSD:DR281177.1,INSD:BP782183.1,
INSD:BE530145.1,INSD:DR281245.1,INSD:EL321517.1,
INSD:BP668030.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX822839.1,INSD:BX823383.1,INSD:AY050772.1,
INSD:AK226370.1"
/note="seed imbibition 2 (SIP2); CONTAINS InterPro
DOMAIN/s: Glycoside hydrolase, catalytic core
(InterPro:IPR017853), Raffinose synthase
(InterPro:IPR008811); BEST Arabidopsis thaliana protein
match is: seed imbibition 1 (TAIR:AT1G55740.1); Has 528
Blast hits to 504 proteins in 147 species: Archae - 29;
Bacteria - 95; Metazoa - 0; Fungi - 82; Plants - 312;
Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink)."
/db_xref="TAIR:AT3G57520"
/db_xref="Araport:AT3G57520"
intron_pos 64:2 (1/12)
intron_pos 146:1 (2/12)
intron_pos 176:2 (3/12)
intron_pos 193:0 (4/12)
intron_pos 223:2 (5/12)
intron_pos 259:2 (6/12)
intron_pos 300:2 (7/12)
intron_pos 485:0 (8/12)
intron_pos 507:2 (9/12)
intron_pos 552:2 (10/12)
intron_pos 625:1 (11/12)
intron_pos 655:0 (12/12)
BEGIN
1 MTITSNISVQ NDNLVVQGKT ILTKIPDNII LTPVTGNGFV SGSFIGATFE QSKSLHVFPI
61 GVLEGLRFMC CFRFKLWWMT QRMGSCGKDI PLETQFMLLE SKDEVEGNGD DAPTVYTVFL
121 PLLEGQFRAV LQGNEKNEIE ICFESGDKAV ETSQGTHLVY VHAGTNPFEV IRQSVKAVER
181 HMQTFHHREK KKLPSFLDWF GWCTWDAFYT DVTAEGVDEG LKSLSEGGTP PKFLIIDDGW
241 QQIENKEKDE NCVVQEGAQF ATRLVGIKEN AKFQKSDQKD TQVSGLKSVV DNAKQRHNVK
301 QVYAWHALAG YWGGVKPAAS GMEHYDSALA YPVQSPGVLG NQPDIVMDSL AVHGLGLVNP
361 KKVFNFYNEL HSYLASCGID GVKVDVQNII ETLGAGLGGR VSLTRSYQQA LEASIARNFT
421 DNGCISCMCH NTDGLYSAKQ TAIVRASDDF YPRDPASHTI HIASVAYNSL FLGEFMQPDW
481 DMFHSLHPTA EYHAAARAVG GCAIYVSDKP GNHNFDLLRK LVLPDGSVLR AKLPGRPTRD
541 CLFADPARDG ISLLKIWNMN KFTGIVGVFN CQGAGWCKET KKNQIHDTSP GTLTGSIRAD
601 DADLISQVAG EDWSGDSIVY AYRSGEVVRL PKGASIPLTL KVLEYELFHI SPLKEITENI
661 SFAPIGLVDM FNSSGAIESI DINHVTDKNP EFFDGEISSA SPALSDNRSP TALVSVSVRG
721 CGRFGAYSSQ RPLKCAVEST ETDFTYDAEV GLVTLNLPVT REEMFRWHVE ILV
//