LOCUS AEE79636.1 441 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana eukaryotic translation initiation
factor 3E protein.
ACCESSION CP002686-8292
PROTEIN_ID AEE79636.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="EIF3E"
/locus_tag="AT3G57290"
/gene_synonym="ATEIF3E-1"
/gene_synonym="ATINT6"
/gene_synonym="eukaryotic translation initiation factor
3E"
/gene_synonym="INT-6"
/gene_synonym="INT6"
/gene_synonym="TIF3E1"
/inference="Similar to RNA sequence,
EST:INSD:DR229394.1,INSD:DR229391.1,INSD:EL993809.1,
INSD:BP820294.1,INSD:AV814248.1,INSD:ES095147.1,
INSD:BP611157.1,INSD:BP858184.2,INSD:BP613799.1,
INSD:BP844162.1,INSD:ES023753.1,INSD:BP595412.1,
INSD:EH974158.1,INSD:BP625250.1,INSD:EG502178.1,
INSD:EL120199.1,INSD:EL215924.1,INSD:AV521534.1,
INSD:BP835895.1,INSD:ES061489.1,INSD:BP566071.1,
INSD:BP605300.1,INSD:BP854897.1,INSD:BP800755.2,
INSD:ES101405.1,INSD:BP831983.1,INSD:ES097238.1,
INSD:ES178179.1,INSD:ES083079.1,INSD:DR229397.1,
INSD:ES143417.1,INSD:ES048487.1,INSD:AI995271.1,
INSD:ES170541.1,INSD:BP844514.1,INSD:AV533066.1,
INSD:DR229393.1,INSD:ES175458.1,INSD:EH854260.1,
INSD:CB254855.1,INSD:ES120192.1,INSD:BP812449.1,
INSD:BP599900.1,INSD:EL161530.1,INSD:ES116644.1,
INSD:BE521603.1,INSD:BP660812.1,INSD:BP634172.1,
INSD:BP625592.1,INSD:EL034504.1,INSD:EL979631.1,
INSD:ES168038.1,INSD:T46710.1,INSD:BP635106.1,
INSD:AA713300.1,INSD:BP812198.1,INSD:ES018392.1,
INSD:BU635038.1,INSD:BP583028.1,INSD:ES199433.1,
INSD:BP575271.1,INSD:AV787923.1,INSD:ES026841.1,
INSD:BP845207.1,INSD:BP563534.1,INSD:DR229409.1,
INSD:ES083296.1,INSD:EG502170.1,INSD:EL096681.1,
INSD:BP663827.1,INSD:EH971478.1,INSD:ES075965.1,
INSD:AV814494.1,INSD:EG502169.1,INSD:BP605873.1,
INSD:EL239935.1,INSD:DR364010.1,INSD:BP617895.1,
INSD:BP628335.1,INSD:BE521767.1,INSD:BP577100.1,
INSD:BE521766.1,INSD:BP652226.1,INSD:ES069592.1,
INSD:BP809392.1,INSD:ES084195.1,INSD:ES208121.1,
INSD:ES001731.1,INSD:ES179320.1,INSD:AV798884.1,
INSD:AV558895.1,INSD:BP638710.1,INSD:ES028009.1,
INSD:ES201634.1,INSD:DR229392.1,INSD:BP825164.1,
INSD:DR229396.1,INSD:BP607555.1,INSD:DR229400.1,
INSD:AV820518.1,INSD:BE521604.1,INSD:EL269087.1,
INSD:ES206232.1,INSD:BP809059.1,INSD:AV798977.1,
INSD:DR229401.1,INSD:EL257600.1,INSD:AV803996.1,
INSD:BP636474.1,INSD:T43721.1,INSD:BP799282.1,
INSD:BP819456.1,INSD:BP606762.1,INSD:CB253341.1,
INSD:ES090400.1,INSD:BP642795.1,INSD:EL290298.1,
INSD:ES102452.1,INSD:AV827650.1,INSD:AV788257.1,
INSD:BP573957.1,INSD:ES086774.1,INSD:DR229408.1,
INSD:DR229407.1,INSD:DR229406.1,INSD:BP663589.1,
INSD:EG502179.1,INSD:BP843943.1,INSD:ES181701.1,
INSD:ES126899.1,INSD:DR229402.1,INSD:BP847439.1,
INSD:R30314.1,INSD:ES078893.1,INSD:DR229395.1,
INSD:ES060221.1,INSD:AV817822.1,INSD:ES056247.1,
INSD:DR229398.1,INSD:AV802078.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX822615.1,INSD:BX825476.1,INSD:AY039913.1,
INSD:AF285832.1,INSD:AY079357.1,INSD:AF255679.1,
INSD:BX823811.1,INSD:BX825198.1"
/note="eukaryotic translation initiation factor 3E
(EIF3E); FUNCTIONS IN: protein binding, translation
initiation factor activity; INVOLVED IN: flower
development, response to salt stress, translation,
photomorphogenesis, transcription initiation; LOCATED IN:
signalosome, eukaryotic translation initiation factor 3
complex, nucleus, plasma membrane, cytoplasm; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Translation initiation
factor 3, subunit 6, eukaryotic (InterPro:IPR016650),
Proteasome component (PCI) domain (InterPro:IPR000717),
Eukaryotic translation initiation factor 3 (eIF3), subunit
6, N-terminal (InterPro:IPR019010); Has 641 Blast hits to
638 proteins in 243 species: Archae - 0; Bacteria - 2;
Metazoa - 287; Fungi - 119; Plants - 138; Viruses - 0;
Other Eukaryotes - 95 (source: NCBI BLink)."
/db_xref="TAIR:AT3G57290"
/db_xref="Araport:AT3G57290"
intron_pos 74:1 (1/7)
intron_pos 126:0 (2/7)
intron_pos 202:0 (3/7)
intron_pos 242:2 (4/7)
intron_pos 316:0 (5/7)
intron_pos 363:2 (6/7)
intron_pos 409:2 (7/7)
BEGIN
1 MEESKQNYDL TPLIAPNLDR HLVFPIFEFL QERQLYPDEQ ILKSKIQLLN QTNMVDYAMD
61 IHKSLYHTED APQEMVERRT EVVARLKSLE EAAAPLVSFL LNPNAVQELR ADKQYNLQML
121 KERYQIGPDQ IEALYQYAKF QFECGNYSGA ADYLYQYRTL CSNLERSLSA LWGKLASEIL
181 MQNWDIALEE LNRLKEIIDS KSFSSPLNQV QNRIWLMHWG LYIFFNHDNG RTQIIDLFNQ
241 DKYLNAIQTS APHLLRYLAT AFIVNKRRRP QLKEFIKVIQ QEHYSYKDPI IEFLACVFVN
301 YDFDGAQKKM KECEEVIVND PFLGKRVEDG NFSTVPLRDE FLENARLFVF ETYCKIHQRI
361 DMGVLAEKLN LNYEEAERWI VNLIRTSKLD AKIDSESGTV IMEPTQPNVH EQLINHTKGL
421 SGRTYKLVNQ LLEHTQAQAT R
//