LOCUS AEE79635.1 226 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Transmembrane proteins 14C protein.
ACCESSION CP002686-8291
PROTEIN_ID AEE79635.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G57280"
/inference="Similar to RNA sequence,
EST:INSD:AV790882.1,INSD:AV791314.1,INSD:EL020969.1,
INSD:DR300282.1,INSD:EL341480.1,INSD:DR300284.1,
INSD:EG439798.1,INSD:CF652465.1,INSD:CF652787.1,
INSD:DR300286.1,INSD:ES076799.1,INSD:EH884718.1,
INSD:AV821373.1,INSD:AV781797.1,INSD:EL205805.1,
INSD:ES106531.1,INSD:EH809624.1,INSD:EL258092.1,
INSD:DR372285.1,INSD:CB252743.1,INSD:DR300289.1,
INSD:DR300288.1,INSD:DR300285.1,INSD:ES197864.1,
INSD:DR300281.1,INSD:DR300283.1,INSD:DR300287.1,
INSD:DR300290.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY085316.1,INSD:BX825319.1,INSD:AY052733.1,
INSD:BX824418.1,INSD:AY039525.1,INSD:BX822818.1"
/note="Transmembrane proteins 14C; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
chloroplast inner membrane, chloroplast envelope;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised
protein family UPF0136, Transmembrane
(InterPro:IPR005349); BEST Arabidopsis thaliana protein
match is: Transmembrane proteins 14C (TAIR:AT3G20510.1);
Has 169 Blast hits to 169 proteins in 36 species: Archae -
0; Bacteria - 2; Metazoa - 27; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink)."
/db_xref="TAIR:AT3G57280"
/db_xref="Araport:AT3G57280"
intron_pos 34:0 (1/5)
intron_pos 110:1 (2/5)
intron_pos 166:1 (3/5)
intron_pos 182:0 (4/5)
intron_pos 195:2 (5/5)
BEGIN
1 MASQISQLAC FSSTNRQFHF QSRSFPCPMI RPQSFVVKSV DGNSSETPAS LSYTAEVSKP
61 VVEKTSKPYS TVDETATNKE SITEPVEEDV ATQPIRAAKI HDFCFGIPYG GLVVSGGLLG
121 FAFSRNLTSL STGVLYGGGL LALSTLSLKI WREGKSSFPY ILGQAVLSAV VFWKNFTAYS
181 MTKKLFPAGV FAVISACMLC FYSYVVLSGG NPPPKKLKPS ATSPSY
//