LOCUS AEE79625.1 406 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana peptide chain release factor protein.
ACCESSION CP002686-8276
PROTEIN_ID AEE79625.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PrfB3"
/locus_tag="AT3G57190"
/gene_synonym="peptide chain release factor 3"
/inference="Similar to RNA sequence,
EST:INSD:EH917084.1,INSD:EL062314.1,INSD:BP626771.1,
INSD:DR379782.1,INSD:EH825544.1,INSD:EL149046.1,
INSD:EH804404.1,INSD:EL083755.1,INSD:EH826903.1,
INSD:EL166369.1,INSD:DR280137.1,INSD:AV439968.1,
INSD:BP846012.1,INSD:EL242224.1,INSD:BP778088.1,
INSD:AV799063.1,INSD:EL323275.1,INSD:EL330813.1,
INSD:EL164675.1,INSD:EL004988.1,INSD:EL062020.1,
INSD:AV827710.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT008450.1,INSD:AY128374.1"
/note="peptide chain release factor, putative; FUNCTIONS
IN: translation release factor activity, codon specific,
translation release factor activity; INVOLVED IN:
translational termination; LOCATED IN: cytoplasm;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide
chain release factor (InterPro:IPR000352), Peptide chain
release factor (InterPro:IPR005139); BEST Arabidopsis
thaliana protein match is: high chlorophyll fluorescent
109 (TAIR:AT5G36170.2); Has 13500 Blast hits to 13496
proteins in 2706 species: Archae - 0; Bacteria - 9313;
Metazoa - 113; Fungi - 108; Plants - 181; Viruses - 0;
Other Eukaryotes - 3785 (source: NCBI BLink)."
/db_xref="TAIR:AT3G57190"
/db_xref="Araport:AT3G57190"
intron_pos 46:1 (1/5)
intron_pos 119:0 (2/5)
intron_pos 186:0 (3/5)
intron_pos 255:0 (4/5)
intron_pos 312:1 (5/5)
BEGIN
1 MAAKIIGGCC SWRRFYRKRT SSRFLIFSVR ASSSMDDMDT VYKQLGLFSL KKKIKDVVLK
61 AEMFAPDALE LEEEQWIKQE ETMRYFDLWD DPAKSDEILL KLADRAKAVD SLKDLKYKAE
121 EAKLIIQLGE MDAIDYSLFE QAYDSSLDVS RSLHHYEMSK LLRDQYDAEG ACMIIKSGSP
181 GAKSQIWTEQ VVSMYIKWAE RLGQNARVAE KCSLLSNKSG VSSATIEFEF EFAYGYLLGE
241 RGVHRLIISS TSNEECSATV DIIPLFLRAS PDFEVKEGDL IVSYPAKEDH KIAENMVCIH
301 HIPSGVTLQS SGERNRFANR IKALNRLKAK LLVIAKEQKV SDVNKIDSKN ILEPREETRS
361 YVSKGHKMVV DRKTGLEILD LKSVLDGNIG PLLGAHISMR RSIDAI
//