LOCUS AEE79591.1 237 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana small and basic intrinsic protein 2;1 protein.
ACCESSION CP002686-8233
PROTEIN_ID AEE79591.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="SIP2;1"
/locus_tag="AT3G56950"
/gene_synonym="SIP2"
/gene_synonym="SMALL AND BASIC INTRINSIC PROTEIN 2"
/gene_synonym="small and basic intrinsic protein 2;1"
/gene_synonym="T8M16.9"
/inference="Similar to RNA sequence,
EST:INSD:AV521424.1,INSD:AV552184.1,INSD:EL067232.1,
INSD:AV549528.1,INSD:AV533328.1,INSD:EL117453.1,
INSD:EL980689.1,INSD:AV522128.1,INSD:AV534948.1,
INSD:AV556827.1,INSD:AV563030.1,INSD:BP638872.1,
INSD:BP589770.1,INSD:DR305908.1,INSD:EL005849.1,
INSD:AV558842.1,INSD:EL075389.1,INSD:BP635110.1,
INSD:AV518028.1,INSD:CB074568.1,INSD:AV531547.1,
INSD:AV519952.1,INSD:BP592438.1,INSD:AV533397.1,
INSD:AV565625.1,INSD:BP634513.1,INSD:T45642.1,
INSD:EH917103.1,INSD:AV784990.1,INSD:BP632529.1,
INSD:AV531642.1,INSD:BP859613.1,INSD:BP619644.1,
INSD:AV564456.1,INSD:BP651490.1,INSD:BP631498.1,
INSD:AV558931.1,INSD:BP593909.1,INSD:AV566570.1,
INSD:BP597578.1,INSD:ES188957.1,INSD:BP642753.1,
INSD:BP624456.1,INSD:DR305909.1,INSD:AV518902.1,
INSD:BP636912.1,INSD:EL304711.1,INSD:AV530391.1,
INSD:EL989010.1,INSD:AI100375.1,INSD:EL033573.1,
INSD:BP577603.1,INSD:EL984769.1,INSD:EL205623.1,
INSD:AV541085.1,INSD:AV522449.1,INSD:AV518931.1,
INSD:EH916667.1,INSD:AA713011.1,INSD:ES080813.1,
INSD:AV519643.1,INSD:BP652971.1,INSD:BP637971.1,
INSD:AV519167.1,INSD:BP655878.1,INSD:BP596584.1,
INSD:BP631185.1,INSD:BP643385.1,INSD:EH827669.1,
INSD:BP654952.1,INSD:EL272755.1,INSD:AV530403.1,
INSD:EL149232.1,INSD:BP653072.1,INSD:AV538923.1,
INSD:AV535025.1,INSD:AI993210.1,INSD:AV565579.1,
INSD:AV561586.1,INSD:AV519430.1,INSD:EH956814.1,
INSD:EH878221.1,INSD:AV519451.1,INSD:BP783236.1,
INSD:AV518152.1,INSD:EL138801.1,INSD:BP657818.1,
INSD:DR305907.1,INSD:AV530648.1,INSD:AV819223.1,
INSD:AV782534.1,INSD:EH850093.1,INSD:AA404750.1,
INSD:EL012514.1,INSD:AV518500.1,INSD:BP586904.1,
INSD:EG516926.1,INSD:BP606261.1,INSD:AV530355.1,
INSD:BP640716.1,INSD:AV565295.1,INSD:AV522560.1,
INSD:DR305910.1,INSD:EL112053.1,INSD:AV522226.1,
INSD:AV519550.1,INSD:AV520588.1,INSD:AV518191.1,
INSD:AV537365.1,INSD:DR263161.1,INSD:AV519162.1,
INSD:AV821946.1,INSD:EG482339.1,INSD:AV562730.1,
INSD:AV564159.1,INSD:AV795494.1,INSD:AV561192.1,
INSD:AV558899.1,INSD:EL247498.1,INSD:AV559863.1,
INSD:BP622761.1,INSD:BP659957.1,INSD:AV519448.1,
INSD:BP659363.1,INSD:EL312059.1,INSD:EL173976.1,
INSD:AV518539.1,INSD:AV806915.1,INSD:EH893682.1,
INSD:AV558197.1,INSD:AV530887.1,INSD:AV530311.1,
INSD:ES108235.1,INSD:BP587474.1,INSD:AV561975.1,
INSD:BP617679.1,INSD:AV543784.1,INSD:BP647765.1,
INSD:AV533703.1,INSD:EL332163.1,INSD:AV518409.1,
INSD:AV519741.1,INSD:AV781831.1,INSD:AV561826.1,
INSD:AV518561.1,INSD:AV531598.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX825250.1,INSD:AF387020.1,INSD:BT006280.1,
INSD:AY087153.1"
/note="small and basic intrinsic protein 2;1 (SIP2;1);
FUNCTIONS IN: transporter activity; INVOLVED IN:
transport; LOCATED IN: endoplasmic reticulum, membrane;
EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic
protein (InterPro:IPR000425); BEST Arabidopsis thaliana
protein match is: Aquaporin-like superfamily protein
(TAIR:AT5G18290.2); Has 1253 Blast hits to 1253 proteins
in 361 species: Archae - 9; Bacteria - 357; Metazoa - 222;
Fungi - 102; Plants - 511; Viruses - 0; Other Eukaryotes -
52 (source: NCBI BLink)."
/db_xref="TAIR:AT3G56950"
/db_xref="Araport:AT3G56950"
intron_pos 97:0 (1/2)
intron_pos 184:0 (2/2)
BEGIN
1 MGRIGLVVTD LVLSFMWIWA GVLVNILVHG VLGFSRTDPS GEIVRYLFSI ISMFIFAYLQ
61 QATKGGLYNP LTALAAGVSG GFSSFIFSVF VRIPVEVIGS ILAVKHIIHV FPEIGKGPKL
121 NVAIHHGALT EGILTFFIVL LSMGLTRKIP GSFFMKTWIG SLAKLTLHIL GSDLTGGCMN
181 PAAVMGWAYA RGEHITKEHL LVYWLGPVKA TLLAVWFFKV VFKPLTEEQE KPKAKSE
//