LOCUS AEE79576.1 478 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana UBP1-associated protein 2A protein.
ACCESSION CP002686-8215
PROTEIN_ID AEE79576.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="UBA2A"
/locus_tag="AT3G56860"
/gene_synonym="UBP1-associated protein 2A"
/inference="Similar to RNA sequence,
EST:INSD:ES003587.1,INSD:EL977337.1,INSD:ES162622.1,
INSD:ES090794.1,INSD:BP825864.1,INSD:BP811800.1,
INSD:EH904118.1,INSD:ES058102.1,INSD:BP799549.1,
INSD:Z17562.1,INSD:EH989220.1,INSD:T46009.1,
INSD:ES053773.1,INSD:BP837872.1,INSD:ES210929.1,
INSD:BP809458.1,INSD:ES006042.1,INSD:BP845184.1,
INSD:EL193094.1,INSD:ES187619.1,INSD:BP865500.1,
INSD:EL006682.1,INSD:BP866248.1,INSD:EG503935.1,
INSD:BP583502.1,INSD:AV797761.1,INSD:T20404.1,
INSD:ES179907.1,INSD:DR368780.1,INSD:ES192077.1,
INSD:AV829889.1,INSD:ES190658.1,INSD:AV563646.1,
INSD:T20458.1,INSD:ES041446.1,INSD:EL084871.1,
INSD:EL002812.1,INSD:ES042228.1,INSD:ES121353.1,
INSD:ES141203.1,INSD:ES012576.1,INSD:ES122231.1,
INSD:EH807020.1,INSD:AV827294.1,INSD:DR268709.1,
INSD:EH952525.1,INSD:DR268708.1,INSD:BP866828.1,
INSD:CB264586.1,INSD:BP825797.1,INSD:BP605216.1,
INSD:CK117827.1,INSD:BP857664.1,INSD:BP575423.1,
INSD:BP578812.1,INSD:ES058973.1,INSD:EG527625.1,
INSD:ES070973.1,INSD:ES051779.1,INSD:AV822163.1,
INSD:EH857852.1,INSD:EG503934.1,INSD:ES083710.1,
INSD:ES181953.1,INSD:CK117770.1,INSD:ES047489.1,
INSD:DR268707.1,INSD:EL122385.1,INSD:ES167868.1,
INSD:EH868521.1,INSD:AV822882.1,INSD:ES164916.1,
INSD:ES006580.1,INSD:ES037231.1,INSD:ES047497.1,
INSD:BP808787.1,INSD:EL047019.1,INSD:EG527624.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AY133549.1,INSD:AF367280.1,INSD:BT006368.1"
/note="UBP1-associated protein 2A (UBA2A); FUNCTIONS IN:
RNA binding, AU-rich element binding; INVOLVED IN: in 6
processes; LOCATED IN: nucleus; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; CONTAINS
InterPro DOMAIN/s: RNA recognition motif, RNP-1
(InterPro:IPR000504), Nucleotide-binding, alpha-beta plait
(InterPro:IPR012677); BEST Arabidopsis thaliana protein
match is: RNA-binding (RRM/RBD/RNP motifs) family protein
(TAIR:AT2G41060.2); Has 31187 Blast hits to 20847 proteins
in 859 species: Archae - 47; Bacteria - 1373; Metazoa -
14793; Fungi - 3614; Plants - 4555; Viruses - 445; Other
Eukaryotes - 6360 (source: NCBI BLink)."
/db_xref="TAIR:AT3G56860"
/db_xref="Araport:AT3G56860"
BEGIN
1 MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE
61 DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ DLLEPFSKEQ VLSLLKEAAE
121 KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS
181 KGYGFILYKS RSGARNALKQ PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS
241 EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301 RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH
361 LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP AIGQALLGSL GTAAGVNPGN
421 GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
//