LOCUS AEE79555.1 386 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pre-mRNA-splicing factor protein.
ACCESSION CP002686-8173
PROTEIN_ID AEE79555.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G56720"
/inference="Similar to RNA sequence,
EST:INSD:BP606193.1,INSD:EG455017.1,INSD:BP615384.1,
INSD:ES047307.1,INSD:AA728683.1,INSD:EL989322.1,
INSD:EL060065.1,INSD:BP842772.1,INSD:EL980122.1,
INSD:ES202292.1,INSD:ES129863.1,INSD:BP660504.1,
INSD:BP645505.1,INSD:EH937138.1,INSD:BP807486.1,
INSD:EL239690.1,INSD:BP608246.1,INSD:EL307589.1,
INSD:EH943480.1,INSD:EL240233.1,INSD:AV522032.1,
INSD:EG455016.1,INSD:AA394431.1,INSD:CK118620.1,
INSD:ES040137.1,INSD:AU236339.1,INSD:DR369047.1,
INSD:AA394430.1,INSD:BP576532.1,INSD:EL140857.1,
INSD:BP807443.1,INSD:AU227238.1,INSD:DR360411.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT029550.1,INSD:BT002965.1"
/note="unknown protein; Has 6239 Blast hits to 4635
proteins in 365 species: Archae - 6; Bacteria - 230;
Metazoa - 3389; Fungi - 659; Plants - 656; Viruses - 13;
Other Eukaryotes - 1286 (source: NCBI BLink)."
/db_xref="TAIR:AT3G56720"
/db_xref="Araport:AT3G56720"
intron_pos 47:1 (1/5)
intron_pos 255:1 (2/5)
intron_pos 283:1 (3/5)
intron_pos 314:0 (4/5)
intron_pos 339:0 (5/5)
BEGIN
1 MDTELNSPPH DDGGDTTTAF RKPSNDGTSR KYRRRALADD GSSSSDGSPE RNQSPNPKHS
61 RKDSEPVHVR KEDRWESDRS RYGRGGVDSH RHDRYSRDDN YGYKRDEYNR HGRDARSTSR
121 DSRGGRHSDR RRVETEYSRL RNDSDRSSHD KYSNSGHRVK SNEKGEDLSS GRRHSDSRVE
181 DNEKRGSRWG FGDRHSRVER KEHEDPEISK EKEVHVKSSR DRSDGKCLAT EDRDTHSKKL
241 KGFISDKFTT GNTNEEKQTS ILKPSPGDVD AAKVAAMQAA ELVNKNLVGT GYLTTDQKKK
301 LLWGKKKSTA SEESAHRWDN ASALIGDPER QEKFNKLMGV KAKVVNQEQN LGEVEAEKQK
361 ELQMDLEKQY TAGLRRRDGR TVGLGL
//