LOCUS AEE79541.1 489 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana hydroxyproline-rich glycoprotein
family protein protein.
ACCESSION CP002686-8153
PROTEIN_ID AEE79541.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G56590"
/inference="Similar to RNA sequence,
EST:INSD:ES120502.1,INSD:EL310835.1,INSD:ES115265.1,
INSD:AA650886.1,INSD:EL995084.1,INSD:ES064225.1,
INSD:ES196606.1,INSD:BP807520.1,INSD:EL135547.1,
INSD:EL028191.1,INSD:EH952945.1,INSD:ES085547.1,
INSD:EH814725.1,INSD:EL142898.1,INSD:EL172357.1,
INSD:EL032659.1,INSD:EL028179.1,INSD:ES159336.1,
INSD:EH867491.1,INSD:ES103972.1,INSD:AA597598.1,
INSD:EL066179.1,INSD:EH840560.1,INSD:EL208070.1,
INSD:BX834856.1,INSD:EL107334.1,INSD:EH981909.1,
INSD:EL088366.1,INSD:AU237213.1,INSD:EL166745.1,
INSD:EL284870.1,INSD:EL234964.1,INSD:EL036640.1,
INSD:EL081486.1,INSD:EG491155.1,INSD:EH800895.1,
INSD:EL990410.1,INSD:EL185469.1,INSD:AU228244.1,
INSD:EL244640.1,INSD:EH800345.1,INSD:EH913611.1,
INSD:EL115274.1,INSD:ES145323.1,INSD:EL179523.1,
INSD:EL318013.1,INSD:EH808440.1,INSD:EH890774.1,
INSD:EL242611.1,INSD:EL970386.1,INSD:EH804828.1,
INSD:EL165674.1,INSD:EL076325.1,INSD:EL240809.1,
INSD:EH927836.1,INSD:EL199850.1,INSD:EG495367.1,
INSD:ES206818.1,INSD:EL301658.1,INSD:EL314207.1,
INSD:EG495368.1,INSD:EL158705.1,INSD:EH916334.1,
INSD:ES172178.1,INSD:BP611031.1"
/note="hydroxyproline-rich glycoprotein family protein;
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana
protein match is: zinc finger (C3HC4-type RING finger)
family protein (TAIR:AT3G10810.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G56590"
/db_xref="Araport:AT3G56590"
intron_pos 83:1 (1/4)
intron_pos 121:0 (2/4)
intron_pos 245:0 (3/4)
intron_pos 462:1 (4/4)
BEGIN
1 MGKNTVEEQN LPVSDGAASA RNNGGGGIST CCCCDWISSY FSLRCVLILA FSAAVFLSAL
61 FWLPPFLGFA DPGDLDLDPR FKDHRIVASF DVGKPISFME DNLMQLENDI TDEISFPMTK
121 VVVLALERLG DLNRTMVIFA IDPEKENSKI PAEIESLIKA AFETLVQKQL SFRLTESLFG
181 EPFFFEVLKF PGGITVIPPQ PIFPLQKAQL LFNFTLNFSI YQIQSNFEEL ASQLKKGINL
241 ASYENLYITL SNSRGSTVAP PTIVHSSVLL TFGSSSRLKQ LAQTITSSHS KNLGLNHTVF
301 GKVKQVRLSS ILPHSPATSS TPSPSPQPET HQYPHHHPHH HHHHHELAPE PSLSPPTKGF
361 APASAPTKHS PLPPRNPPCP YEQRRPKGNS ALNHHTAPPT PAPHRSQPHP PAPNPAPPRH
421 HAIPVSSPLP HVVFAHIPPP SKSSPESEPT GEKSPSPAPT PSSASIGPTF KKASSQLLVV
481 VVAVIIICL
//