LOCUS       AEE79522.1               391 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana autophagy 18 D-like protein protein.
ACCESSION   CP002686-8128
PROTEIN_ID  AEE79522.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /gene="ATG18D"
                     /locus_tag="AT3G56440"
                     /gene_synonym="ATATG18D"
                     /gene_synonym="homolog of yeast autophagy 18 (ATG18) D"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AU228631.1,INSD:EG471594.1,INSD:AV545315.1,
                     INSD:AV554046.1,INSD:AU237557.1,INSD:EL995525.1,
                     INSD:ES024788.1,INSD:EH982765.1,INSD:EL248408.1"
                     /inference="Similar to RNA sequence, mRNA:INSD:AK229064.1"
                     /note="homolog of yeast autophagy 18 (ATG18) D (ATG18D);
                     CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing
                     domain (InterPro:IPR011046), WD40 repeat
                     (InterPro:IPR001680), WD40/YVTN repeat-like-containing
                     domain (InterPro:IPR015943), WD40 repeat, subgroup
                     (InterPro:IPR019781); BEST Arabidopsis thaliana protein
                     match is: homolog of yeast autophagy 18C
                     (TAIR:AT2G40810.2); Has 1451 Blast hits to 1383 proteins
                     in 243 species: Archae - 0; Bacteria - 34; Metazoa - 579;
                     Fungi - 434; Plants - 212; Viruses - 2; Other Eukaryotes -
                     190 (source: NCBI BLink)."
                     /db_xref="TAIR:AT3G56440"
                     /db_xref="Araport:AT3G56440"
     intron_pos      244:0 (1/3)
     intron_pos      321:1 (2/3)
     intron_pos      362:2 (3/3)
BEGIN
        1 MDPRRNFQPG GYDSRNTFTS GSFGPPDFGE SDEAELVSVS WNQDYSCFAA GTSHGFRIYN
       61 CEPFKETFRR ELKDGGFKIV EMLFRSNILA LVGGGPNSQY PSNKVLIWDD HQGRCISEFT
      121 FRSEIRAVKL RRDRIVVVLE HKIYVYNFMD LRLLHQIENM ANPRGLCCLS HHMNTSVLAC
      181 PGIRRGEVRV EHFGLNMVQI INAHDSNIAC MTLTLDGLLL ATASTKGTLI RIFNTMDGTR
      241 LQEVRRGVDR ADIYSIALSP NVQWLAVSSD KGTVHIFSLR VRVIGEDAYS TEHETSSNSL
      301 QPLVSPASGA NPGSSLSFLR GVLPKYFSSE WSFSQFHVPE VTQYFAAFGA QNTIAIIGLD
      361 GSFYRCNFDP VNGGEMTQLE HFHFLKQDSP R
//