LOCUS AEE79508.1 437 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Melibiase family protein protein.
ACCESSION CP002686-8103
PROTEIN_ID AEE79508.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G56310"
/inference="Similar to RNA sequence,
EST:INSD:EL978950.1,INSD:EL209708.1,INSD:ES074451.1,
INSD:DR245132.1,INSD:CB260490.1,INSD:AA586069.1,
INSD:EG525450.1,INSD:ES215801.1,INSD:AV789364.1,
INSD:BX837337.1,INSD:BP575052.1,INSD:EL001379.1,
INSD:EH937273.1,INSD:EH825223.1,INSD:BP583286.1,
INSD:ES152703.1,INSD:AV544039.1,INSD:EL127466.1,
INSD:BP659235.1,INSD:EL177870.1,INSD:BP822535.2,
INSD:EH808565.1,INSD:DR245127.1,INSD:BP568554.1,
INSD:AV788874.1,INSD:BP615087.1,INSD:EH969167.1,
INSD:BP568724.1,INSD:EH884584.1,INSD:EH919819.1,
INSD:AI999505.1,INSD:EL213214.1,INSD:ES198626.1,
INSD:ES064389.1,INSD:ES020860.1,INSD:DR245131.1,
INSD:EL056755.1,INSD:EH835282.1,INSD:EL266605.1,
INSD:EL037330.1,INSD:EH832111.1,INSD:DR245130.1,
INSD:BP577800.1,INSD:EL007783.1,INSD:AV819490.1,
INSD:DR245126.1,INSD:ES078412.1,INSD:DR277417.1,
INSD:BP603162.1,INSD:ES013428.1,INSD:EH938742.1,
INSD:AV801606.1,INSD:BX834362.1,INSD:ES119181.1,
INSD:CA781821.1,INSD:EH863263.1,INSD:EL306543.1,
INSD:BP663419.1,INSD:ES184578.1,INSD:CB255760.1,
INSD:BP601533.1,INSD:EL187347.1,INSD:BP614632.1,
INSD:BE527796.1,INSD:EL261299.1,INSD:EL167634.1,
INSD:AV552507.1,INSD:BP567279.1,INSD:EL126214.1,
INSD:EL011752.1,INSD:EH938371.1,INSD:BP574154.1,
INSD:EL048078.1,INSD:ES117500.1,INSD:DR382949.1,
INSD:EL304905.1,INSD:BP569547.1,INSD:EH825683.1,
INSD:AV519033.2,INSD:AV802538.1,INSD:ES047082.1,
INSD:AU226780.1,INSD:BP649015.1,INSD:T46055.1,
INSD:BP564952.1,INSD:EH979517.1,INSD:BP599587.1,
INSD:EH987625.1,INSD:BP670441.1,INSD:BE529892.1,
INSD:AV784329.1,INSD:ES115893.1,INSD:BP778750.1,
INSD:ES187496.1,INSD:DR245133.1,INSD:T04018.1,
INSD:AV823375.1,INSD:BP778749.1,INSD:BP570624.1,
INSD:EL024577.1,INSD:EL029213.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX824990.1,INSD:BX823782.1,INSD:AY074321.1,
INSD:BX823822.1,INSD:BX823461.1,INSD:BX824901.1,
INSD:AY114020.1,INSD:BX825512.1,INSD:BX823219.1,
INSD:BX826044.1,INSD:BX823260.1,INSD:BX822739.1,
INSD:BX823316.1,INSD:BX823606.1,INSD:BX825040.1"
/note="Melibiase family protein; FUNCTIONS IN:
alpha-galactosidase activity, hydrolase activity,
hydrolyzing O-glycosyl compounds, catalytic activity;
INVOLVED IN: carbohydrate metabolic process, metabolic
process, lactose catabolic process; LOCATED IN: vacuole;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type
TIM barrel (InterPro:IPR013785), Glycoside hydrolase,
family 27 (InterPro:IPR002241), Glycoside hydrolase, clan
GH-D (InterPro:IPR000111), Glycoside hydrolase, catalytic
core (InterPro:IPR017853); BEST Arabidopsis thaliana
protein match is: alpha-galactosidase 2
(TAIR:AT5G08370.1); Has 1574 Blast hits to 1565 proteins
in 338 species: Archae - 4; Bacteria - 582; Metazoa - 329;
Fungi - 273; Plants - 224; Viruses - 0; Other Eukaryotes -
162 (source: NCBI BLink)."
/db_xref="TAIR:AT3G56310"
/db_xref="Araport:AT3G56310"
intron_pos 76:2 (1/13)
intron_pos 96:1 (2/13)
intron_pos 115:1 (3/13)
intron_pos 127:0 (4/13)
intron_pos 161:2 (5/13)
intron_pos 186:0 (6/13)
intron_pos 205:2 (7/13)
intron_pos 227:2 (8/13)
intron_pos 255:2 (9/13)
intron_pos 277:1 (10/13)
intron_pos 305:0 (11/13)
intron_pos 335:1 (12/13)
intron_pos 355:0 (13/13)
BEGIN
1 MVIMKKMKDS VLFLVVGLFS LSVLVSQSIA GRVKAPLLQS NTGGLVFSKS FNSIYDTSMY
61 GRLQLNNGLA RTPQMGWNSW NFFACNINET VIKETADALV SSGLADLGYI HVNIDDCWSN
121 LLRDSEGQLV PHPETFPSGI KLLADYVHSK GLKLGIYSDA GVFTCEVHPG SLFHEVDDAD
181 IFASWGVDYL KYDNCFNLGI KPIERYPPMR DALNATGRSI FYSLCEWGVD DPALWAKEVG
241 NSWRTTDDIN DTWASMTTIA DLNNKWAAYA GPGGWNDPDM LEIGNGGMTY EEYRGHFSIW
301 ALMKAPLLIG CDVRNMTAET LEILSNKEII AVNQDPLGVQ GRKIQANGEN DCQQVWSGPL
361 SGDRMVVALW NRCSEPATIT ASWDMIGLES TISVSVRDLW QHKDVTENTS GSFEAQVDAH
421 DCHMYVLTPQ TVSHSDV
//