LOCUS AEE79507.1 413 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Melibiase family protein protein.
ACCESSION CP002686-8104
PROTEIN_ID AEE79507.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G56310"
/inference="Similar to RNA sequence,
EST:INSD:EL978950.1,INSD:BP577800.1,INSD:EL209708.1,
INSD:AV819490.1,INSD:EL007783.1,INSD:ES074451.1,
INSD:AA586069.1,INSD:ES078412.1,INSD:BP603162.1,
INSD:ES013428.1,INSD:EH938742.1,INSD:AV801606.1,
INSD:EG525450.1,INSD:ES215801.1,INSD:BX834362.1,
INSD:ES119181.1,INSD:AV789364.1,INSD:BP575052.1,
INSD:CA781821.1,INSD:EH863263.1,INSD:EL306543.1,
INSD:BP663419.1,INSD:ES184578.1,INSD:EL001379.1,
INSD:EH937273.1,INSD:BP601533.1,INSD:CB255760.1,
INSD:EH825223.1,INSD:BP583286.1,INSD:EL187347.1,
INSD:BP614632.1,INSD:ES152703.1,INSD:BE527796.1,
INSD:AV544039.1,INSD:EL127466.1,INSD:BP659235.1,
INSD:EL261299.1,INSD:EL177870.1,INSD:BP822535.2,
INSD:EL167634.1,INSD:BP567279.1,INSD:EH808565.1,
INSD:EL126214.1,INSD:BP574154.1,INSD:EH938371.1,
INSD:EL048078.1,INSD:ES117500.1,INSD:BP568554.1,
INSD:DR382949.1,INSD:BP569547.1,INSD:EL304905.1,
INSD:AV788874.1,INSD:EH825683.1,INSD:AV519033.2,
INSD:AV802538.1,INSD:BP615087.1,INSD:ES047082.1,
INSD:AU226780.1,INSD:EH969167.1,INSD:BP568724.1,
INSD:BP649015.1,INSD:EH884584.1,INSD:EH919819.1,
INSD:AI999505.1,INSD:T46055.1,INSD:EL213214.1,
INSD:ES198626.1,INSD:BP564952.1,INSD:EH979517.1,
INSD:ES064389.1,INSD:ES020860.1,INSD:BP599587.1,
INSD:EH987625.1,INSD:EL056755.1,INSD:EH835282.1,
INSD:BP670441.1,INSD:BE529892.1,INSD:AV784329.1,
INSD:EL266605.1,INSD:ES115893.1,INSD:BP778750.1,
INSD:ES187496.1,INSD:T04018.1,INSD:AV823375.1,
INSD:EL037330.1,INSD:BP778749.1,INSD:BP570624.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX822949.1"
/note="Melibiase family protein; FUNCTIONS IN:
alpha-galactosidase activity, hydrolase activity,
hydrolyzing O-glycosyl compounds, catalytic activity;
INVOLVED IN: carbohydrate metabolic process, metabolic
process; LOCATED IN: vacuole; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Aldolase-type TIM barrel
(InterPro:IPR013785), Glycoside hydrolase, family 27
(InterPro:IPR002241), Glycoside hydrolase, catalytic core
(InterPro:IPR017853); BEST Arabidopsis thaliana protein
match is: alpha-galactosidase 2 (TAIR:AT5G08370.1); Has
35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
Plants - 531; Viruses - 0; Other Eukaryotes - 9610
(source: NCBI BLink)."
/db_xref="TAIR:AT3G56310"
/db_xref="Araport:AT3G56310"
intron_pos 76:2 (1/12)
intron_pos 96:1 (2/12)
intron_pos 115:1 (3/12)
intron_pos 137:2 (4/12)
intron_pos 162:0 (5/12)
intron_pos 181:2 (6/12)
intron_pos 203:2 (7/12)
intron_pos 231:2 (8/12)
intron_pos 253:1 (9/12)
intron_pos 281:0 (10/12)
intron_pos 311:1 (11/12)
intron_pos 331:0 (12/12)
BEGIN
1 MVIMKKMKDS VLFLVVGLFS LSVLVSQSIA GRVKAPLLQS NTGGLVFSKS FNSIYDTSMY
61 GRLQLNNGLA RTPQMGWNSW NFFACNINET VIKETADALV SSGLADLGYI HVNIGIKLLA
121 DYVHSKGLKL GIYSDAGVFT CEVHPGSLFH EVDDADIFAS WGVDYLKYDN CFNLGIKPIE
181 RYPPMRDALN ATGRSIFYSL CEWGVDDPAL WAKEVGNSWR TTDDINDTWA SMTTIADLNN
241 KWAAYAGPGG WNDPDMLEIG NGGMTYEEYR GHFSIWALMK APLLIGCDVR NMTAETLEIL
301 SNKEIIAVNQ DPLGVQGRKI QANGENDCQQ VWSGPLSGDR MVVALWNRCS EPATITASWD
361 MIGLESTISV SVRDLWQHKD VTENTSGSFE AQVDAHDCHM YVLTPQTVSH SDV
//