LOCUS AEE79498.1 156 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transcription regulator protein.
ACCESSION CP002686-8086
PROTEIN_ID AEE79498.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G56220"
/inference="Similar to RNA sequence,
EST:INSD:ES136035.1,INSD:BP798176.1,INSD:ES195877.1,
INSD:ES053200.1,INSD:EH950626.1,INSD:ES178445.1,
INSD:BP584836.1,INSD:EH954330.1,INSD:AU235942.1,
INSD:ES115005.1,INSD:ES134395.1,INSD:BP569565.1,
INSD:ES177588.1,INSD:ES064844.1,INSD:ES125570.1,
INSD:ES115570.1,INSD:ES210781.1,INSD:ES011023.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX825204.1,INSD:BT004764.1,INSD:AK228035.1"
/note="transcription regulators; FUNCTIONS IN:
transcription regulator activity; INVOLVED IN: regulation
of transcription; CONTAINS InterPro DOMAIN/s:
Helix-loop-helix DNA-binding domain (InterPro:IPR001092);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G40435.1); Has 248 Blast hits to 248
proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 248; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G56220"
/db_xref="Araport:AT3G56220"
intron_pos 28:0 (1/3)
intron_pos 71:0 (2/3)
intron_pos 129:0 (3/3)
BEGIN
1 MVSREHKRGS SLREKFHLLR SITDSHAESE TSIIVDASKY IKKLKQKVEK INNATTSEQS
61 FRESSDPNPM VTVETLEKGF MIKVMSRKNE AGMLVCVLET FEDLGLDVVE ARVSCTDTFS
121 LHAIGSSNND DGDCIDAEAV KQAVAEAIRT WSDSHA
//