LOCUS AEE79485.1 745 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DUF399 family protein, putative (
DUF399 and DUF3411) protein.
ACCESSION CP002686-8067
PROTEIN_ID AEE79485.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G56140"
/inference="Similar to RNA sequence,
EST:INSD:BP842036.1,INSD:EH800788.1,INSD:EL325632.1,
INSD:EL193936.1,INSD:BP808322.1,INSD:EL293521.1,
INSD:AV812832.1,INSD:EH829361.1,INSD:CB258871.1,
INSD:DR356454.1,INSD:BP586420.1,INSD:ES174634.1,
INSD:EL293315.1,INSD:BP845886.1,INSD:DR356452.1,
INSD:EL310645.1,INSD:BP613229.1,INSD:EL316186.1,
INSD:DR356449.1,INSD:BP863724.1,INSD:BP664223.1,
INSD:EH809261.1,INSD:AV802797.1,INSD:BP589815.1,
INSD:DR356455.1,INSD:BP849261.1,INSD:EL973576.1,
INSD:BP612926.1,INSD:EH804070.1,INSD:BP618528.1,
INSD:EL970807.1,INSD:CB258873.1,INSD:BP614635.1,
INSD:AV543757.1,INSD:BX835213.1,INSD:EG494924.1,
INSD:AV552158.1,INSD:AV815771.1,INSD:DR356451.1,
INSD:DR356450.1,INSD:AV828359.1,INSD:AV801171.1,
INSD:EL100350.1,INSD:BX838672.1,INSD:AV788351.1,
INSD:BX837453.1,INSD:EH838196.1,INSD:DR355561.1,
INSD:EH814941.1,INSD:CB256866.1,INSD:EL211543.1,
INSD:EH968335.1,INSD:DR356453.1,INSD:BP831768.1,
INSD:EL258434.1,INSD:BP562330.2,INSD:EL028819.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT010340.1,INSD:AK227110.1,INSD:AY093111.1"
/note="Protein of unknown function (DUF399 and DUF3411);
FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF399
(InterPro:IPR007314), Protein of unknown function DUF3411
(InterPro:IPR021825); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF399 and DUF3411)
(TAIR:AT2G40400.2); Has 538 Blast hits to 538 proteins in
131 species: Archae - 0; Bacteria - 182; Metazoa - 33;
Fungi - 6; Plants - 279; Viruses - 6; Other Eukaryotes -
32 (source: NCBI BLink)."
/db_xref="TAIR:AT3G56140"
/db_xref="Araport:AT3G56140"
intron_pos 219:2 (1/6)
intron_pos 263:0 (2/6)
intron_pos 440:0 (3/6)
intron_pos 476:0 (4/6)
intron_pos 659:0 (5/6)
intron_pos 697:0 (6/6)
BEGIN
1 MKLTTNDLFA SQPLFHCPCS SSSRPRRRRF YGLHFPINLT SEKNNSLSIV ALSDSDLPSR
61 TAFSRRAFLL APPLLVSAAS LFLKPSVSLA SEESSSATVT SPAESAAPPP PPATTTPSPP
121 PPVNKEETIT SRIYDATAIG EPMAMGKDKK KVWEKLLNAR VVYLGEAEQV PTKDDKELEL
181 EIVRNLRKRC VESERQISVA LEAFPLDLQD QLNQYMDKRM DGETLKSYVT HWPAQRWQEY
241 EPLLSYCRDN SVRLIACGTP LKVLRTVQAE GIRGLSKSER KLYTPPAGSG FISGFSSFSR
301 RSTFDMSLPT QIVPFGPSSY LSAQARVVED HTMSQVILQA VADGGGTGLL LVVTGASHVE
361 YGSRGTGLPA RISRKFPKKN QVVVLLDPER QFLRREGETP VADFLWYSAA RPCSRNCFDR
421 AEIARVMNAA GRRRDALPPD IQNGLDLGLV SPEVLQNLFD LEQYPLISEL TQRFQGFRER
481 LLADPKFLNR LAIEEAISIT TTLIAQYEKR KENFFEEIDY VITDTVRGSV VDFFTVWLPA
541 PTLSFLSYAD ETTGPDSIDA LRGLLGSIPD NAFQKSLAGR EWNLNLRIAS VIVGGLKLAG
601 VGVVSSFAAV GASNALNIAR KVIKPELVVA EKPKRSPLLK TAMVYGGFLG TSANLRYQII
661 AGLIEHRLSD ELSSQPLLVN AISFVVRTLN SYFGTQQWID LARSTGLQTQ KSIPASKEIS
721 EALEEPTVEC DTTTEEESID KLNNQ
//