LOCUS AEE79464.1 487 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana trichome birefringence-like protein
(DUF828) protein.
ACCESSION CP002686-8040
PROTEIN_ID AEE79464.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ESK1"
/locus_tag="AT3G55990"
/gene_synonym="ESKIMO 1"
/gene_synonym="TBL29"
/gene_synonym="TRICHOME BIREFRINGENCE-LIKE 29"
/inference="Similar to RNA sequence,
EST:INSD:EG515184.1,INSD:EL320979.1,INSD:EL310794.1,
INSD:EG457535.1,INSD:EG468168.1,INSD:EG515185.1,
INSD:EH830125.1,INSD:EG468177.1,INSD:EH835001.1,
INSD:AV540397.1,INSD:EG515187.1,INSD:AI997525.1,
INSD:AU239534.1,INSD:AU230855.1,INSD:EG457534.1,
INSD:BP658913.1,INSD:EH821921.1,INSD:AV551873.1"
/inference="Similar to RNA sequence, mRNA:INSD:AK118662.1"
/note="ESKIMO 1 (ESK1); FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: response to freezing, positive
regulation of transcription, response to cold; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem, fruit,
root, flower, leaf; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF231, plant (InterPro:IPR004253); BEST
Arabidopsis thaliana protein match is: TRICHOME
BIREFRINGENCE-LIKE 28 (TAIR:AT2G40150.1); Has 1336 Blast
hits to 1309 proteins in 28 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 2; Plants - 1334; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="TAIR:AT3G55990"
/db_xref="Araport:AT3G55990"
intron_pos 195:2 (1/4)
intron_pos 253:0 (2/4)
intron_pos 319:2 (3/4)
intron_pos 372:2 (4/4)
BEGIN
1 MQPWRRKFPL FETGVTMKQR KNSNLSIFVV VFSVFLFGIF MYNEDVKSIA EFPFSTSKPH
61 DVHDEATPIT EITTLPVQES IKNSDPIQES IKNADSVQDS VKDVAEPVQE EVSKTEEVKK
121 IELFAATEDE EDVELPPEEC DLFTGEWVFD NETHPLYKED QCEFLTAQVT CMRNGRRDSL
181 YQNWRWQPRD CSLPKFKAKL LLEKLRNKRM MFVGDSLNRN QWESMVCLVQ SVVPPGRKSL
241 NKTGSLSVFR VEDYNATVEF YWAPFLVESN SDDPNMHSIL NRIIMPESIE KHGVNWKGVD
301 FLVFNTYIWW MNTFAMKVLR GSFDKGDTEY EEIERPVAYR RVMRTWGDWV ERNIDPLRTT
361 VFFASMSPLH IKSLDWENPD GIKCALETTP ILNMSMPFSV GTDYRLFSVA ENVTHSLNVP
421 VYFLNITKLS EYRKDAHTSV HTIRQGKMLT PEQQADPNTY ADCIHWCLPG LPDTWNEFLY
481 TRIISRS
//