LOCUS AEE79449.2 461 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Amidohydrolase family protein.
ACCESSION CP002686-8012
PROTEIN_ID AEE79449.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="LAF3"
/locus_tag="AT3G55850"
/gene_synonym="LAF3 ISF1"
/gene_synonym="LAF3 ISF2"
/gene_synonym="LAF3 ISOFORM 2"
/gene_synonym="LONG AFTER FAR-RED 3"
/gene_synonym="LONG AFTER FAR-RED 3 ISOFORM 1"
/inference="Similar to RNA sequence,
EST:INSD:AV803317.1,INSD:EL064282.1,INSD:ES181968.1,
INSD:ES171100.1,INSD:EG455989.1,INSD:AV790621.1,
INSD:BP598598.1,INSD:ES070657.1,INSD:EL984008.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BT000585.1,INSD:AY295343.1,INSD:BX825282.1"
/note="LONG AFTER FAR-RED 3 (LAF3); FUNCTIONS IN:
hydrolase activity, hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds; INVOLVED IN:
biological_process unknown; LOCATED IN: perinuclear region
of cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Amidohydrolase 3 (InterPro:IPR013108), Metal-dependent
hydrolase, composite domain (InterPro:IPR011059); Has
30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink)."
/db_xref="TAIR:AT3G55850"
/db_xref="Araport:AT3G55850"
intron_pos 25:1 (1/11)
intron_pos 61:0 (2/11)
intron_pos 102:1 (3/11)
intron_pos 167:1 (4/11)
intron_pos 196:0 (5/11)
intron_pos 232:0 (6/11)
intron_pos 264:0 (7/11)
intron_pos 297:0 (8/11)
intron_pos 322:0 (9/11)
intron_pos 366:0 (10/11)
intron_pos 404:2 (11/11)
BEGIN
1 MAQVGLRGVS QKDEFCKMVK DAVQNAKEGS WILGGGWNND FWGGELPSAS WIDEISPRNP
61 VWLIRMDGHM ALANSLALKI AGVISLTEDP VGGTIMRMPS GEPTGLLIDA AMELVTPWVK
121 EISVDERREA LFRASKYALT RGVTTVIDLG RYFPGTTDEL SWKDFQDVYL YADSSKKMMI
181 RTCLFFPITT WSRLLDLKLQ KGSVLSEWLY LGGVKAFIDG SLGSNSALFY EEYIDTPNNY
241 GLEVMDPEKL SNFTMAADKS GLQVAIHAIG DKANDMILDM YESVAAANGD RDRRFRIEHA
301 QHLAPGSANR FGQLHIVASV QPDHLLDDAD SVAKKLGSER AVKESYLFQS LLNGNALLAL
361 GSDWPVADIN PLHSIRTAVK RIPPKWDHAW IPSERISFTD ALIAQTISAA RAAFLDHHLG
421 SLSPGKLADF VILSTNSWDE FSKDVSASVL ATYVGGKQLY P
//