LOCUS AEE79417.1 579 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana ROP (rho of plants) guanine nucleotide
exchange factor 6 protein.
ACCESSION CP002686-7976
PROTEIN_ID AEE79417.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="ROPGEF6"
/locus_tag="AT3G55660"
/gene_synonym="ATROPGEF6"
/gene_synonym="KINASE PARTNER PROTEIN-LIKE"
/gene_synonym="KPP-LIKE"
/gene_synonym="ROP (rho of plants) guanine nucleotide
exchange factor 6"
/inference="Similar to RNA sequence,
EST:INSD:ES140089.1,INSD:ES133120.1,INSD:EH815587.1,
INSD:EL144677.1,INSD:EL123962.1,INSD:EL001974.1"
/inference="Similar to RNA sequence,
mRNA:INSD:BX822206.1,INSD:BT020279.1,INSD:BT021117.1"
/note="ROP (rho of plants) guanine nucleotide exchange
factor 6 (ROPGEF6); FUNCTIONS IN: Rho guanyl-nucleotide
exchange factor activity; INVOLVED IN: biological_process
unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant
structures; EXPRESSED DURING: 9 growth stages; CONTAINS
InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE
(InterPro:IPR005512); BEST Arabidopsis thaliana protein
match is: ROP guanine nucleotide exchange factor 5
(TAIR:AT5G05940.1); Has 306 Blast hits to 304 proteins in
17 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi -
0; Plants - 304; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="TAIR:AT3G55660"
/db_xref="Araport:AT3G55660"
intron_pos 107:1 (1/6)
intron_pos 146:1 (2/6)
intron_pos 198:0 (3/6)
intron_pos 223:0 (4/6)
intron_pos 316:0 (5/6)
intron_pos 438:0 (6/6)
BEGIN
1 MEDNSCIGFE GSKRFGETSK RIIGLIDSVT ESTTDSSLSS SSSGVGSSSG RSSVAERSVS
61 SPPTKSQILG WPLGQGSWRK SSGKMKKKTP TKIDDFGFKR VGTETSEIEL LKERMAKLLL
121 GEDMSGSGEG VCPALAISNA ITNLYAAILG QQWRLEPIPS EKKLMWRREI EVLLSVSDHI
181 VELVPSFQNF PNGNKIEVMN CRPRSDLFTC LPALRKLDNM LIEILDSFGE TEFWYVDQGI
241 VAAESARSNS FREDGDKWWL PLPRVPSDGL TEQTRKKLDH TREFTNQILK ACMSINSIAL
301 AEMEVPQSYL EALPKNGRSC LGDFLYRNIT SDNFSADHLL ESIDLSSELA VVEMANRVEA
361 SMYVWRRRAH SRHLISLYRS TSTRWGMIVK EMMMHQTDGD KREIFAERAE SLLIRLKQRF
421 PGLRQTALDT SKIQYNKDVG KSILESYSRV LESLAYSIGV RIEEVLFMDD ISKDDGDGDD
481 DSCSDKLRLL SKEAASGGSG SLREKLSAPS LFSVSFSGTS TPYRTLSFSA STPSYSPMPL
541 ISPINGGRGG ERAPFLSGRN IRERCGFGPK KALANYLRG
//