LOCUS AEE79391.1 1115 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana protein affected trafficking 2 protein.
ACCESSION CP002686-7938
PROTEIN_ID AEE79391.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PAT2"
/locus_tag="AT3G55480"
/gene_synonym="AP-3 beta"
/gene_synonym="beta-subunit of adaptor protein complex 3"
/gene_synonym="protein affected trafficking 2"
/gene_synonym="WAT1"
/gene_synonym="WEAK ACID TOLERANT 1"
/inference="Similar to RNA sequence,
EST:INSD:ES187975.1,INSD:EL982983.1,INSD:BX839444.1,
INSD:BX835614.1,INSD:BP788147.1,INSD:AV791400.1,
INSD:ES173198.1,INSD:BP613212.1,INSD:BP620842.1,
INSD:ES070161.1,INSD:BP626900.1,INSD:AU229042.1,
INSD:BP780905.1,INSD:EH851485.1,INSD:BP621809.1,
INSD:BP651225.1,INSD:BP604740.1,INSD:BP645631.1"
/note="protein affected trafficking 2 (PAT2); FUNCTIONS
IN: protein transporter activity, binding; INVOLVED IN:
intracellular protein transport, vesicle-mediated
transport, endocytosis, protein transport; LOCATED IN:
membrane coat, Golgi apparatus; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Adaptor protein complex AP-3, beta
subunit (InterPro:IPR017108), Armadillo-like helical
(InterPro:IPR011989), Armadillo-type fold
(InterPro:IPR016024), Clathrin/coatomer adaptor,
adaptin-like, N-terminal (InterPro:IPR002553); BEST
Arabidopsis thaliana protein match is: Adaptin family
protein (TAIR:AT4G23460.1); Has 2490 Blast hits to 1771
proteins in 223 species: Archae - 0; Bacteria - 20;
Metazoa - 1008; Fungi - 721; Plants - 224; Viruses - 0;
Other Eukaryotes - 517 (source: NCBI BLink)."
/db_xref="TAIR:AT3G55480"
/db_xref="Araport:AT3G55480"
intron_pos 73:0 (1/10)
intron_pos 98:2 (2/10)
intron_pos 182:0 (3/10)
intron_pos 392:0 (4/10)
intron_pos 450:0 (5/10)
intron_pos 492:1 (6/10)
intron_pos 529:0 (7/10)
intron_pos 596:0 (8/10)
intron_pos 910:2 (9/10)
intron_pos 998:2 (10/10)
BEGIN
1 MFNKFGSTSE TLSKASAGLL RIGTDAHLYD DPEDVNIAPL LDSKFESEKC EALKRLLALI
61 AQGFDVSNFF PQVVKNVASQ SSEVKKLVYL YLLQYAEKRP NEALLSINYF QKDLGDPNPL
121 VRAWALRTMA GIRLHVIAPL ALAAVSKCAR DPAVYVRRCA ANALPKLHDL RLEEHASAIE
181 ELVGILLNDH SPGVVGAAAA AFTSICPNNF KLIGKNYKKL CQILPDVEEW GQILLIGTLL
241 RYVVARHGLV RESLMLSIHG TNSNGFCEKD GLGRDLTLDK EDGGKSDSFD VNLVSLVSKC
301 YIQGPDEYLS RSSCTDTVSS AFDTKETTSI AHNEDVKILL QCTSPLLWSN NSAVVLAAAG
361 VQWIMAPLED VKKIVKPLLF LLRSSSASKY VVLCNILVFA KAVPSLFAPH FENFFICSSD
421 AYQVKAYKLE MLSLIATTSS IASILREFED YIKDPDRRFA ADTVAAIGLC AKRLMTIPTT
481 CLDGLLALVR QESFAGDFES ADGEAGVLVQ AVMSIQTMIE RDPLRHEKVL IQLFRSLDSI
541 KVAAARATII WMVGVYCSLG HIIPRMLTTI TKYLAWSFKS EASETKLQIL NTIAKVLISA
601 EAGDFHMLKR IVVYVFELGE YDLSYDIRDR TRFLKKLLSC KLASHEPAED SVASQENIAA
661 HVVEHVFGRK LKSVSPITLH NRFYLPGSLS QIVLHAAPGY EPLPKPCSFV YEEQDQLSDL
721 DKQREAAADL DGSEESSETG DENGSSDYDS ESSNGSDFSS EGDERTVSND ANDPAAPLIQ
781 ISETSVSADQ EELRSRRALD LWLDDQPSTS NQTPSALNSN QSSYAKISIG DVGSRVKPKS
841 YSLVDPGNGS GLKVDYAFLS EVSNVSPLHV CVEVLFENSS AEPILEVNLE DEESMKVADS
901 SEQTLVGKAN ASYNNIPTLI PMEEISCLEP HQSTKRLIQV RFHHHLLPMR LTLHYNEKKV
961 PVKLRPDLGY LVKPFSMSIE EFLATESRLP GMFEYSRRCT FDDHVKDSRT ENGKDKFLSI
1021 CESITLKVLS NSNLHLVSVD LPVANSLEDA TGLRLRFSSK ILSSEIPLLI TITVEGKCTE
1081 VLNLTVKINC EETVFGLNLL NRIANFMVEP SSSAT
//