LOCUS AEE79390.1 987 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana protein affected trafficking 2 protein.
ACCESSION CP002686-7939
PROTEIN_ID AEE79390.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /gene="PAT2"
/locus_tag="AT3G55480"
/gene_synonym="AP-3 beta"
/gene_synonym="beta-subunit of adaptor protein complex 3"
/gene_synonym="protein affected trafficking 2"
/gene_synonym="WAT1"
/gene_synonym="WEAK ACID TOLERANT 1"
/inference="Similar to RNA sequence,
EST:INSD:ES187975.1,INSD:EL982983.1,INSD:AV825491.1,
INSD:BX835614.1,INSD:BP788147.1,INSD:AV791400.1,
INSD:ES173198.1,INSD:BP613212.1,INSD:BP620842.1,
INSD:ES070161.1,INSD:BP626900.1,INSD:AU229042.1,
INSD:BP780905.1,INSD:EH851485.1,INSD:BP621809.1,
INSD:BP651225.1,INSD:BP604740.1,INSD:BP645631.1"
/inference="Similar to RNA sequence, mRNA:INSD:AY059780.1"
/note="protein affected trafficking 2 (PAT2); FUNCTIONS
IN: binding; INVOLVED IN: intracellular protein transport,
vesicle-mediated transport; LOCATED IN: membrane coat,
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Armadillo-like helical (InterPro:IPR011989),
Armadillo-type fold (InterPro:IPR016024),
Clathrin/coatomer adaptor, adaptin-like, N-terminal
(InterPro:IPR002553); BEST Arabidopsis thaliana protein
match is: Adaptin family protein (TAIR:AT4G11380.1); Has
2700 Blast hits to 1765 proteins in 249 species: Archae -
0; Bacteria - 810; Metazoa - 816; Fungi - 546; Plants -
173; Viruses - 0; Other Eukaryotes - 355 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G55480"
/db_xref="Araport:AT3G55480"
intron_pos 54:0 (1/8)
intron_pos 264:0 (2/8)
intron_pos 322:0 (3/8)
intron_pos 364:1 (4/8)
intron_pos 401:0 (5/8)
intron_pos 468:0 (6/8)
intron_pos 782:2 (7/8)
intron_pos 870:2 (8/8)
BEGIN
1 MAGIRLHVIA PLALAAVSKC ARDPAVYVRR CAANALPKLH DLRLEEHASA IEELVGILLN
61 DHSPGVVGAA AAAFTSICPN NFKLIGKNYK KLCQILPDVE EWGQILLIGT LLRYVVARHG
121 LVRESLMLSI HGTNSNGFCE KDGLGRDLTL DKEDGGKSDS FDVNLVSLVS KCYIQGPDEY
181 LSRSSCTDTV SSAFDTKETT SIAHNEDVKI LLQCTSPLLW SNNSAVVLAA AGVQWIMAPL
241 EDVKKIVKPL LFLLRSSSAS KYVVLCNILV FAKAVPSLFA PHFENFFICS SDAYQVKAYK
301 LEMLSLIATT SSIASILREF EDYIKDPDRR FAADTVAAIG LCAKRLMTIP TTCLDGLLAL
361 VRQESFAGDF ESADGEAGVL VQAVMSIQTM IERDPLRHEK VLIQLFRSLD SIKVAAARAT
421 IIWMVGVYCS LGHIIPRMLT TITKYLAWSF KSEASETKLQ ILNTIAKVLI SAEAGDFHML
481 KRIVVYVFEL GEYDLSYDIR DRTRFLKKLL SCKLASHEPA EDSVASQENI AAHVVEHVFG
541 RKLKSVSPIT LHNRFYLPGS LSQIVLHAAP GYEPLPKPCS FVYEEQDQLS DLDKQREAAA
601 DLDGSEESSE TGDENGSSDY DSESSNGSDF SSEGDERTVS NDANDPAAPL IQISETSVSA
661 DQEELRSRRA LDLWLDDQPS TSNQTPSALN SNQSSYAKIS IGDVGSRVKP KSYSLVDPGN
721 GSGLKVDYAF LSEVSNVSPL HVCVEVLFEN SSAEPILEVN LEDEESMKVA DSSEQTLVGK
781 ANASYNNIPT LIPMEEISCL EPHQSTKRLI QVRFHHHLLP MRLTLHYNEK KVPVKLRPDL
841 GYLVKPFSMS IEEFLATESR LPGMFEYSRR CTFDDHVKDS RTENGKDKFL SICESITLKV
901 LSNSNLHLVS VDLPVANSLE DATGLRLRFS SKILSSEIPL LITITVEGKC TEVLNLTVKI
961 NCEETVFGLN LLNRIANFMV EPSSSAT
//