LOCUS AEE79381.1 1017 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 2-oxoglutarate dehydrogenase, E1
component protein.
ACCESSION CP002686-7929
PROTEIN_ID AEE79381.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 23459830)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 23459830)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 23459830)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
protein /locus_tag="AT3G55410"
/inference="Similar to RNA sequence,
EST:INSD:ES149645.1,INSD:AA651423.1,INSD:BP571246.1,
INSD:BP807076.1,INSD:BP842982.1,INSD:ES109785.1,
INSD:BE522976.1,INSD:EG419563.1,INSD:CB263907.1,
INSD:ES119319.1,INSD:ES122290.1,INSD:BP567421.1,
INSD:BP572149.1,INSD:BP598578.1,INSD:BP798808.1,
INSD:ES067658.1,INSD:AV539816.1,INSD:AU235445.1,
INSD:AV559145.1,INSD:BP569267.1,INSD:BP644247.1,
INSD:BP836726.1,INSD:BP657528.1,INSD:EL109597.1,
INSD:EG504929.1,INSD:EL067226.1,INSD:EL969583.1,
INSD:EL978602.1,INSD:BP839051.1,INSD:AV544247.1,
INSD:CB258949.1,INSD:EH810872.1,INSD:CD534411.1,
INSD:AV552736.1,INSD:EH809743.1,INSD:DR368807.1,
INSD:EL315502.1,INSD:AI994644.1,INSD:BP813629.1,
INSD:BP829848.1,INSD:EG504928.1,INSD:BP613878.1,
INSD:BP647625.1,INSD:BP655950.1,INSD:CB263778.1,
INSD:BP570806.1,INSD:ES124368.1,INSD:AV540100.1,
INSD:EL103214.1,INSD:AV551823.1,INSD:AV544432.1,
INSD:AV548093.1,INSD:BP637865.1,INSD:EL279078.1,
INSD:CD530972.1,INSD:H37127.1,INSD:EL206532.1,
INSD:AU226145.1,INSD:ES192729.1,INSD:EH820592.1,
INSD:AV547637.1,INSD:BP777211.1,INSD:EH816354.1,
INSD:BP567422.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AK227494.1,INSD:BT004643.1,INSD:AK222082.1,
INSD:AK229884.1"
/note="2-oxoglutarate dehydrogenase, E1 component;
FUNCTIONS IN: oxoglutarate dehydrogenase
(succinyl-transferring) activity, cobalt ion binding, zinc
ion binding; INVOLVED IN: glycolysis, metabolic process;
LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: 2-oxoglutarate dehydrogenase, E1
component (InterPro:IPR011603), Dehydrogenase, E1
component (InterPro:IPR001017), Transketolase-like,
pyrimidine-binding domain (InterPro:IPR005475); BEST
Arabidopsis thaliana protein match is: 2-oxoglutarate
dehydrogenase, E1 component (TAIR:AT5G65750.1); Has 10999
Blast hits to 10962 proteins in 1954 species: Archae - 31;
Bacteria - 4409; Metazoa - 546; Fungi - 299; Plants - 167;
Viruses - 0; Other Eukaryotes - 5547 (source: NCBI
BLink)."
/db_xref="TAIR:AT3G55410"
/db_xref="Araport:AT3G55410"
intron_pos 517:0 (1/7)
intron_pos 592:2 (2/7)
intron_pos 703:2 (3/7)
intron_pos 786:0 (4/7)
intron_pos 829:0 (5/7)
intron_pos 901:0 (6/7)
intron_pos 942:1 (7/7)
BEGIN
1 MVWFRAGSSV TKLAVRRILN QGASYATRTR SIPSQTRSFH STICRPKAQS APVPRAVPLS
61 KLTDSFLDGT SSVYLEELQR AWEADPNSVD ESWDNFFRNF VGQAATSPGI SGQTIQESMR
121 LLLLVRAYQV NGHMKAKLDP LGLEQREIPE DLDLALYGFT EADLDREFFL GVWQMSGFMS
181 ENRPVQTLRS ILTRLEQAYC GNIGFEYMHI ADRDKCNWLR EKIETPTPWR YNRERREVIL
241 DRLAWSTQFE NFLATKWTTA KRFGLEGGES LIPGMKEMFD RAADLGVESI VIGMSHRGRL
301 NVLGNVVRKP LRQIFSEFSG GIRPVDEVGY TGTGDVKYHL GTSYDRPTRG GKKIHLSLVA
361 NPSHLEAADS VVVGKTRAKQ YYSNDLDRTK NLGILIHGDG SFAGQGVVYE TLHLSALPNY
421 TTGGTIHIVV NNQVAFTTDP RAGRSSQYCT DVAKALSAPI FHVNGDDVEA VVHACELAAE
481 WRQTFHSDVV VDLVCYRRFG HNEIDEPSFT QPKMYKVIKN HPSTLQIYHK KLLECGEVSQ
541 QDIDRIQEKV NTILNEEFVA SKDYLPKKRD WLSTNWAGFK SPEQISRVRN TGVKPEILKT
601 VGKAISSLPE NFKPHRAVKK VYEQRAQMIE SGEGVDWALA EALAFATLVV EGNHVRLSGQ
661 DVERGTFSHR HSVLHDQETG EEYCPLDHLI MNQDPEMFTV SNSSLSEFGV LGFELGYSME
721 SPNSLVLWEA QFGDFANGAQ VIFDQFISSG EAKWLRQTGL VMLLPHGYDG QGPEHSSARL
781 ERYLQMSDDN PYVIPDMEPT MRKQIQECNW QIVNATTPAN YFHVLRRQIH RDFRKPLIVM
841 APKNLLRHKD CKSNLSEFDD VQGHPGFDKQ GTRFKRLIKD QNDHSDLEEG IRRLVLCSGK
901 VYYELDDERK KVGATDVAIC RVEQLCPFPY DLIQRELKRY PNAEIVWCQE EAMNMGAFSY
961 ISPRLWTAMR SVNRGDMEDI KYVGRGPSAA TATGFYTFHV KEQAGLVQKA IGKEPIN
//